Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F000725905.1_202014-07-21] 158 sequences; 27,817,468 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq62 111 1e-19 >seq62 Length=53519 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || | ||| || || || || || ||||| || || | | ||| |||| ||| Sbjct 26278 ACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGCCACAAACCTGACATCCTCC 26337 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 || ||||| |||| | |||| | | ||| || || || || || ||||| ||||| | | Sbjct 26338 AACTGCTTTCCTGAATATATTAGCCTCTGCTGGTCAGGTGGGATTCCTTCCTTATCCTCA 26397 Query 101381 ATTTTTTGTTTTACAATTTCTACA-GTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 |||||| || ||| || ||| || || || | ||||| || || |||| ||||| Sbjct 26398 ATTTTTGACTTAACA-TTCCTAATCGTTTCGGATGCCTCCACATCCAGGGTGATGGTTTT 26456 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||| |||||||| ||||||||||| Sbjct 26457 TCCGGTTAATGTTTTTACGAATATCTGCAT 26486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396277636916406