Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F000725905.1_202014-07-21] 158 sequences; 27,817,468 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq6 100 4e-16 >seq6 Length=3498471 Score = 100 bits (110), Expect = 4e-16 Identities = 153/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 47797 ATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCT 47856 |||||||| || | ||| || || ||||| |||||||| ||||||| ||||||||| Sbjct 1460160 ATAACAAAGTCGTTAGGCTCATCCTGTTGTAGCATTAAATACATAGCACGGACATAATCC 1460219 Query 47857 CTGGCATGTCCCCAGTCACG--AAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCT 47914 | ||||||||||| || || | || || | || |||| | || ||| |||| Sbjct 1460220 TTTGCATGTCCCCAATCTCGGTAGGTAGAT--ATATCCCCTAAAACTATGGCGTCCTGCT 1460277 Query 47915 TACCTT--CAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACC 47972 | || |||| ||| | ||| | || ||||| || | ||||||||||||||| || Sbjct 1460278 CATTTTTGCAGATATT--TGCTAACCCCCTGGTAATTTTCCTAGTTACAAAAGTTTCCCC 1460335 Query 47973 ACGTCTTGGAGATTCATGATTAAAAAGAATACCA 48006 | |||||| ||||||||| || ||||| ||| Sbjct 1460336 TCTCCTTGGACTTTCATGATTGAAGAGAATGCCA 1460369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665493085648560