Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F000725905.1_202014-07-21] 158 sequences; 27,817,468 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 1e-14 >seq4 Length=3285730 Score = 95.1 bits (104), Expect = 1e-14 Identities = 195/290 (67%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 175216 AAAGATGAACTTGAAGAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGT 175275 ||| | ||||||||||| || | |||| | | ||| | | || | || | || Sbjct 1889792 AAACAAGAACTTGAAGAAATAATTGATTATTTAAAGAATTCTGATAAATTTACAAAAATA 1889851 Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 ||||||||| | || || || || | ||| | || ||||| ||||| || | Sbjct 1889852 GGTGCCAAGTTACCGAAGGGGATACTCCTGTCCGGTGAACCGGGTACAGGAAAAACGTTA 1889911 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAAC 175395 | || |||| || ||||| ||| | ||||| || ||||| || || | | | | Sbjct 1889912 ATTGCTAGAGCGATAGCGGGGGAAGCGAATGTTCCTTTCATACAAGCATCAGGCTCCGAA 1889971 Query 175396 TTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCC 175455 |||| ||| ||||| || ||||| ||||||| |||| | | || ||||| || ||| Sbjct 1889972 TTTGAGGAAATGTTCGTAGGTGTTGGTGCCAGAAGGATAAGAGAGCTCTTCCAAGCAGCC 1890031 Query 175456 CGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGG 175505 || || |||||||| |||||||||||||| |||||||| || || Sbjct 1890032 AAAAAACATGCGCCATGTATCGTCTTCATTGATGAAATTGATGCAGTTGG 1890081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568421775040