Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F000725905.1_202014-07-21] 158 sequences; 27,817,468 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq10 421 9e-113 seq12 196 6e-45 seq5 185 1e-41 >seq10 Length=1594295 Score = 421 bits (466), Expect = 9e-113 Identities = 1074/1608 (67%), Gaps = 35/1608 (2%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || ||||| || | || || || || || || || || |||||| ||| || | Sbjct 565962 GCCATCGGTATTGACCTTGGTACCACCTATTCCTGCGTCGGAGTATGGAGAAACGAAAAT 565903 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 ||||| || || | |||||||| |||||| | || |||||||| ||||||||||| || Sbjct 565902 GTAGATATCATTGCCAATGACCAGGGAAACAGAACCACTCCATCTTACGTTGCCTTCACT 565843 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | || | || ||||||||||||| || || || || | |||||| || Sbjct 565842 GACACGGAGAGGCTAATTGGAGATGCCGCTAAGAACCAAGTGGCAAGGAACCCAGAGAAC 565783 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 ||||| ||||| || ||| | | ||||| | ||||| | || || || | Sbjct 565782 ACTGTTTTTGATGCAAAGAGGTTAATTGGAAGGAAGTTCACTGAATCTTCTGTGCAGAGC 565723 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 ||||| || ||||| | | | || ||||||| | ||| ||||| |||||| | Sbjct 565722 GATATGAAACACTGGCCATTTACTGTCAAGTCCGGTGTTGATGAGAAGCCCATGATTGAG 565663 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTG 195658 || | ||| || ||||||||| ||| || |||||||| || || ||||| ||| Sbjct 565662 GTATCCTATCAGGGAGAGAAGAAATTATTCCACCCTGAAGAAATCTCTTCCATGGTTTTG 565603 Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTG 195718 |||||||| || | ||| ||| | || | || || | | ||| ||||||| | Sbjct 565602 CAAAAGATGAAAGAAAATGCAGAAGCGTTTTTAGGAAAGTCCATAAAAAATGCAGTCATT 565543 Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || || ||||| || | |||||||||| | || || || |||||||| | | ||||| Sbjct 565542 ACCGTGCCAGCTTATTTTAATGATTCACAAAGGCAAGCCACGAAGGACGCAGGTACTATT 565483 Query 195779 GCGGGTCTAAACTGTCTT-AGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 || ||| | || |||| | ||||||||||| || ||||| || ||||| ||||||||||| Sbjct 565482 GCTGGTTTGAA-TGTCATGAGAATTATCAACGAGCCAACTGCAGCTGCTATTGCTTATGG 565424 Query 195838 TCTGGACAAGAACAAGG--ACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 |||| ||| || |||| | | || || || | | || || || ||||| || || Sbjct 565423 TCTGCACA--AAAAAGGAAAGGGTGAAAAGAACATCCTCATTTTCGACCTCGGAGGAGGA 565366 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || ||||| || || || | ||||| | ||| || |||||||| ||||| || ||| Sbjct 565365 ACTTTCGATGTATCCCTCCTAACGATTGAGGATGGAATTTTCGAAGTGAAGGCCACAGCT 565306 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGT-CTGA 196014 || ||||| || |||| ||||||||||| || || || | ||||| ||| Sbjct 565305 GGAGATACGCACTTAGGAGGTGAAGATTTTGA-CAACAGGTTGGTGAACTTTTGTGTTGA 565247 Query 196015 TGAGTTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCG 196071 || || |||| |||| || || ||| | ||| ||| || || ||| Sbjct 565246 AGATTTTAAAAGAAAAAATAGAGGAAAGGATTTATCTAAGAATAGCAGAGC-CTTAAGAA 565188 Query 196072 GCTTA-GGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGG 196130 | ||| | ||| |||||| | ||||| || || | || || | | ||| | | Sbjct 565187 GATTACGAACTCAATGTGAGAGAGCCAAGCGTACCTTATCCTCCTCTACACAAGCCACCA 565128 Query 196131 TTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTT 196190 | || ||||| || | || || || || |||| | | || | | | || | | Sbjct 565127 TCGAAATTGACTCCCTTTTCGAAGGTATCGACTACAGTGTGACGGTGAGTAGAGCCAGAT 565068 Query 196191 TTGAAGAGTTAAACTCTGATTTGTTTA-GGAAGTG-TATGGAA---CCTGTTGAACAAGT 196245 |||| | ||||||| | | ||| ||| || | | |||||||| | || Sbjct 565067 TTGAGG-----AACTCTGTATCGATTACTTCCGTGATACGCTAATTCCTGTTGAGAAGGT 565013 Query 196246 ACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATC 196305 | | || || | |||||| ||| | || | ||| |||||||||| || || || Sbjct 565012 ATTGAAAGATGCCATGATGGACAAGAAGAGCGTGCACGAAGTTGTCCTTGTTGGTGGTTC 564953 Query 196306 AACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGATTTAA 196364 || | ||||| || |||||| | | | || | ||||| || || || Sbjct 564952 CACAAGAATTCCCAAAATTCAA-ACACTCATTAAGGAGTTCTTTAACGGAAAGGAAGCCT 564894 Query 196365 ACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTC 196424 || | | |||||||| |||||||| ||||| |||||||| || || || || || ||| Sbjct 564893 GCAGATCCATCAACCCTGATGAAGCCGTTGCGTATGGTGCAGCAGTACAAGCAGCCATTT 564834 Query 196425 TCTCAGGTGTTGACAAT--AATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGT 196482 | || |||| |||| ||| || |||||| | |||| | ||||| || | Sbjct 564833 TGTCTGGTG--ACCAATCCAATGCGGTACAAGATTTGTTGCTCTTAGATGTGTGTTCCTT 564776 Query 196483 ATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAAC 196542 |||||| ||| | ||||| || || || |||||||| || | ||||| || || || || Sbjct 564775 ATCCCTCGGTTTGGAAACCGCAGGAGGAGTTATGACCAAGCTGATTGAGAGAAATACCAC 564716 Query 196543 TATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCA 196602 || || | |||||| ||| |||| | || ||| | ||||| |||||||| || Sbjct 564715 CATCCCAGCAAAGAAGAGTCAAATCTTCACTACCTATGCTGATAACCAACCAGGAGTGTT 564656 Query 196603 TATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGG--AACT 196660 || ||||| || |||||||| | ||| | ||||| || || || |||| || | Sbjct 564655 GATCCAAGTGTACGAAGGAGAGAGAGCCCTAACTAAGGACAA-CAACTTGTTGGGTAAAT 564597 Query 196661 TTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTC 196720 ||| | ||| || || ||| | ||||| ||| || ||||| ||| | ||| ||| Sbjct 564596 TTCACCTAGAC-GGTATCCCACCAGCACCGAGAAAAGTCCCACAAATTGAAGTTACCTTT 564538 Query 196721 GATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCT 196780 ||||| || || ||||| || || || || || |||| || || | | || ||| | Sbjct 564537 GATATTGATGCTAATGGTATCCTTAATGTTACTGCTGTTGAAAAATCCAC-GGGAAAACA 564479 Query 196781 GAA-AAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTAT 196839 ||| | ||| ||||||||||||||||| | | || || |||||||| ||||| Sbjct 564478 GAACCATATTACCATTACCAATGACAAGGGAAGATTGTCCCCAGAAGAAATTGACCGTAT 564419 Query 196840 GGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGGTATATGAGAA 196887 ||| | || || |||||||||| | |||||| || | | || |||| Sbjct 564418 GGTGAACGACGCTGAAAAGTACAAAGCAGAAGATGAAGAAAATAAGAA 564371 >seq12 Length=1585989 Score = 196 bits (216), Expect = 6e-45 Identities = 795/1239 (64%), Gaps = 29/1239 (2%) Strand=Plus/Plus Query 195626 TTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCT 195685 ||||| || ||| |||| | ||||| ||| || ||||| || | || |||| Sbjct 744670 TTTGCGCCAGAACAAATCAGTGCCATGGTTTTGGAAAAAATGAAAGAAATAGCTCAATCC 744729 Query 195686 TTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCA 195745 || |||| || | || ||| | |||||||| || ||||| || ||||||| |||| || Sbjct 744730 TTTTTGGGAAAGCCAGTTAAAAACGCAGTTGTAACAGTACCAGCCTACTTCAATGATGCA 744789 Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805 || |||| || ||||||||||| | | ||||| ||| ||||| | || | ||||| Sbjct 744790 CAGAGACAAGCAACAAAGGACGCAGGAACCATTGCAGGTTTAAACATTGTTCGTATTATA 744849 Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAA 195865 ||||||||||| || || || | ||||| ||| ||||||||| | ||||| | Sbjct 744850 AATGAACCAACTGCAGCAGCTTTGGCTTACGGTTTGGACAAGA------AGGAAGAGACG 744903 Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925 | | ||| ||| ||| | || || || || || ||||| || || | || || Sbjct 744904 AGCATTTTGGTCTACGATTTAGGAGGAGGAACTTTCGATGTGTCCATTTTAGTCATCGAC 744963 Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985 |||| | || || || | || || || || |||| ||| |||| || || || ||| Sbjct 744964 AATGGTGTGTTTGAGGTTTACGCCACGGCAGGAAATACCCATTTAGGAGGAGAGGACTTC 745023 Query 195986 GATGCACGTCTTCTCCGTCA-TTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGAT-- 196042 ||| | | || | | | ||| || | || | | |||| || | |||| Sbjct 745024 GATCAAAGAGTTATGGATTATTTTATCAAAATTTTTAAGAAG-AAGACAAACATAGATTT 745082 Query 196043 -ATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGT-GAACGTGCCAAAC 196100 | |||| || || || | || ||| || | | || ||| ||| || Sbjct 745083 AAGATCTG---ATAAGAGAGC-CATCCAAAAGTTAAGAAAGGAAGTCGAAATTGCAAAGA 745138 Query 196101 GAACTCTCTCTTCTACGGCTC-AAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATT 196159 ||| | | || | || || | ||| | |||||||||| | | || ||| | Sbjct 745139 GAAATTTATC-TGTAGTGCACTCTACACAGATTGAGATTGAAGACATCGTAGAAGGACAT 745197 Query 196160 GACTTCTATACAACTATTACCCGTGC-ACGTTTTGAAGAGTTAAACTCTGATTTGTTTAG 196218 |||| | || | || | || | |||| ||||| || || ||| || ||||| Sbjct 745198 AGTTTCTCTGAGACCTTGACGAGAGCCAAGTTT-GAAGAATTGAATGATGACTTATTTAG 745256 Query 196219 GAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGT 196278 | | | ||||| || | | ||||| ||||||||| || ||| || | Sbjct 745257 AGAAACTTTAGAACCCGTAAAGAAGGTACTAGATGACGCAAAATATGAAAAGAGCAAAAT 745316 Query 196279 TGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTC 196338 |||||||| || || || |||||||| || ||||| || || |||||||| || | Sbjct 745317 CGATGAAATCGTTCTAGTAGGAGGATCTACTCGTATCCCCAAAATTCAACAAATTATAAA 745376 Query 196339 TAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTA 196398 || ||||| |||||| ||| | | || ||||| ||||||||||| || || Sbjct 745377 AGAATTTTTCAACGGTAAAGAACCAAATAGAGGTATTAACCCAGATGAAGCAGTAGCATA 745436 Query 196399 TGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACGTCCAAGATCT 196458 ||||| ||| ||||||| | ||| | | || || || ||| | |||||| | Sbjct 745437 CGGTGCTGCCATTCAGGCGGGAATTATTT----TG-GGAGAAGAAT----TGCAAGATGT 745487 Query 196459 TCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGAC 196518 | || || |||||| | || || || | ||| | ||||| | || ||| | ||||| Sbjct 745488 GGTTCTGCTAGATGTTACTCCACTAACCTTAGGTATAGAAACCGTTGGAGGTATCATGAC 745547 Query 196519 TAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTA 196578 || | ||| | || || ||| |||||| || |||||| ||| |||||| || || Sbjct 745548 CCAACTGATTAAAAGAAATACAGTTATTCCAACGAAGAAGTCACAGACCTTTTCTACCTA 745607 Query 196579 TTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAA 196638 || || ||||||| ||| || ||||| | |||||| ||| | | | || Sbjct 745608 CCAAGACAACCAACCAGCTGTGTTAATCCAAGTTTTTGAAGGTGAAAGAGCATTAACCAA 745667 Query 196639 GGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGT 196698 ||||||||| || | |||| ||||| | | || || ||| | |||| |||||||| Sbjct 745668 GGATAACCACCTTTTAGGAAAATTCGAACTTTCAGGAATCCCACCAGCACAGAGAGGTGT 745727 Query 196699 TCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGA 196758 || | ||| | || |||| |||| |||||| || || |||| ||| || Sbjct 745728 CCCCAAAATTGAAGTGACCTTCACAGTAGATAAAAATGGTATCCTCCACGTAGAAGCGGA 745787 Query 196759 GGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTC 196818 || || | | | || ||| | | ||| ||||||||||| || || | || || Sbjct 745788 AGATAAAGGTACAGGAAAAAGTAAGGGAATTACAATTACCAATGATAAAGGAAGACTGTC 745847 Query 196819 TAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAA 196857 || || |||| ||| ||| || | ||||| ||||| Sbjct 745848 CAAAGAACAAATCGAAAAAATGATTAACGATGCAGAAAA 745886 >seq5 Length=2463301 Score = 185 bits (204), Expect = 1e-41 Identities = 860/1342 (64%), Gaps = 40/1342 (3%) Strand=Plus/Plus Query 78011 CTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTATTCACGCAACACCTACTTTGTT 78069 || || |||||| || ||||| ||| ||| |||| |||||||||||||| ||||| Sbjct 674687 CTAGAGACGTATCATCTTATGTCTCAAAAATAT-TTTACACACGCAACACCTACGTTGTT 674745 Query 78070 TAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGAGGA 78129 ||| | || || ||| | || || ||||| || |||||||| || | || | || Sbjct 674746 CAATTCTGGGACGCCCAGACCGCAAATGTCGTCCTGTTTCCTTCTCTGTATGAAAGCTGA 674805 Query 78130 CTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGCTCAGATTTCTAAGTGGGCTGG 78189 || ||| | ||||| | || ||| || | | |||| || | |||| || |||||| Sbjct 674806 TTCGATTGAAGGTATTTTCGAGACGCTGAAACAGTGCGCCCTGATTAGCAAAACGGCTGG 674865 Query 78190 TGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGGATTAGAGGAACTAA 78249 ||| || || | | || ||| || | | | | || ||| ||||||||||| || Sbjct 674866 TGGAATTGGAGTAGCGGTACAGGATATTAGAGGACAAAACTCCTACATTAGAGGAACCAA 674925 Query 78250 TGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTATGT 78309 || || | || | | || ||||| ||||| ||||||| |||||| | ||||| Sbjct 674926 CGGAATATCCAACGGGTTAGTGCCAATGCTGAGGGTGTTCAATGATACAGCTAGATATGT 674985 Query 78310 CAACCAAGCGGGTCG---TAGGAAGGGGTCATTCGCTATGTACCTTGAACCTTGGCACGC 78366 |||||| || | || ||||| || || || ||||| | ||||| |||||| | Sbjct 674986 AGACCAAGGTGGCGGAAAGAGAAAGGGATCCTTTGCAGTGTACATCGAACCATGGCACTC 675045 Query 78367 CGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCGATGCAG 78426 ||| | | || ||| | || |||||| || || || | |||||| || || Sbjct 675046 AGATATTTTCGAATTTCTAGACCTTCGTAAAAATCACGGGAAAGAGGAACTAAGAGCTAG 675105 Query 78427 GGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGGAAGGAGG 78486 || | ||| |||| | ||| | || || ||||| ||||||||||| | ||| Sbjct 675106 AGACCTTTTCTATGCTGTATGGGTCCCTGACCTTTTCATGAAGAGAGTAAAAGAAAATCA 675165 Query 78487 TAAATGGTCTCTTTTCTGTCCAGAT--AAGACTAAGGGTCTTTCAGATGTATACGGGGAA 78544 || ||| || | | || || || | | | | || | | || | | | || || Sbjct 675166 GAATTGGACTTTGATGTGCCCGAATGAATGTCCAGGGTTAAGTGAG-TCT-TGGGGTGAG 675223 Query 78545 GAATTCGAAAAATTGTACACTAAATACGAAGAGGAAGGTCTCGCTATTAAGACAAT--TG 78602 ||||||||||| | ||| ||||| || || |||||| | | | || || | || Sbjct 675224 GAATTCGAAAAGCTATACTTAAAATATGAGGAAGAAGGTATGGGCAAAAAAACTGTCCTG 675283 Query 78603 ATGCATCTGAACTATGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCACCCCGTATA 78662 ||| || |||||| || ||| | ||||||| | ||| || || || || | Sbjct 675284 GCGCA--AGATCTATGGTTTGCCATTTTGCAAAGTCAGATAGAAACGGGTGTTCCCTACA 675341 Query 78663 TGCTATACAAAGACAGCTGTAACAGAAAGTCTAACCAAAAGAACCTAGGTGTCATCAAAA 78722 || | || ||||| |||||| ||||| |||||||||||| | || || ||| Sbjct 675342 TGTTGTATAAAGATTCTTGTAACGCGAAGTCCAACCAAAAGAACTTGGGGACGATAAAAT 675401 Query 78723 GCTCTAACCTTTGCACAGAAATTCTGGAATACACGGATAAGAATGAAACAGCTGTATGTA 78782 | |||||| || || ||| | || || || | ||| || ||||||| Sbjct 675402 GTAGTAACCTCTGTTGTGAGATTATTGAGTATACTTCCCCAGACGAAGTGGCCGTATGTA 675461 Query 78783 ATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGATCGAGAATTAAAGACATTTGATTATT 78842 || | | || ||||| | || ||||| || || | | || || | || | | || Sbjct 675462 ATTTGGCCTCCATCGCGTTGTGCAAATTTGTCGA-CGTGGAAAAAGGAGAATTCAATTTT 675520 Query 78843 CA-AAGCTCCACGAAATTACAAAAATCGTAACTAAAAATTTAAATCGTGTAATTGACCGT 78901 | || || |||||||||| ||||| | || || || | | | || || | Sbjct 675521 AAGAAACTGTACGAAATTACCAAAATTATTACACGTAACTTGGACCAAATTATAGAGAGG 675580 Query 78902 AACTACTACCCAGTCGAGACTGCTAAATATTCTAATATGAAACATAGACCAATTGGTCTA 78961 || |||||||| || || ||| || || || | || ||| ||||| || || || Sbjct 675581 AATTACTACCCTGTGCAGGAGGCTGAACGATCCAACAAGAGACACAGACCCATAGGGATA 675640 Query 78962 GGTGTTCAAGGATTGGCAGATGTATTCA-ACTTGTGTGGTCTTCCCTTCGATTGCGAAGA 79020 || || ||||| |||||||| |||| ||| | | | || | || | ||| Sbjct 675641 GGAGTACAAGGCTTGGCAGACACCTTCATGCTTCT-TAGATACCCATATGAATCCGATTC 675699 Query 79021 TTC-AAGGACTATGAATGCTCATATTTTCGAGACTATTTATCATGCAGCTTTAGAAGCAA 79079 | | ||||| | | ||| |||||||| || || ||| |||| ||||| || | Sbjct 675700 TGCGAAGGAAT-TAAATAAAAGAATTTTCGAAACAATGTATTATGCTGCTTTGGA--GAT 675756 Query 79080 GTTCA--GAACTTGCTGAAATTAATGGGCCTTATGAGAGTTTCGAGGGTTCACCCGCTTC 79137 || || ||| | || || | | || |||||||||| | | ||||| || ||| Sbjct 675757 GTCCATGGAATTGGCACAAGTGTACGGACCTTATGAGACCTACCAGGGTAGTCCAGCTAG 675816 Query 79138 ACAAGGTCTTCTTCA--ACCAGATCT---ATGGGAAGGTGAAGCTAAATACAGTGGTCGT 79192 ||||| ||||||| | | || | ||| |||||| | | | | | | ||| Sbjct 675817 CCAAGGAATTCTTCAGTTCGACATGTGGAATGTCAAGGTGGA-CAACAAATATTGG---- 675871 Query 79193 TACGATTGGGATGCAATGAGAAAGCG--TGTAATGACGAAGGGTCTGAGAAACAGTCTTC 79250 ||||||||| || ||| ||| | ||| || | | || | ||||| || | Sbjct 675872 ---GATTGGGAT--AAATTGAAGGCGAATATAAAGAAGCACGGGTTAAGAAATTCGCTCC 675926 Query 79251 TCGTAGCACCAATGCCCACTGCTTCGACGGCTCAGATCCTCGGTAATAATGAGTGTTTTG 79310 | | ||||| ||||| |||||||||||| | || || || || || || |||| ||||| Sbjct 675927 TGCTGGCACCTATGCCTACTGCTTCGACGTCACAAATTCTTGGCAACAACGAGTCTTTTG 675986 Query 79311 AACCATACACTACAAACATATA 79332 |||| ||||| | ||||| || Sbjct 675987 AACCGTACACGAGTAACATTTA 676008 Score = 167 bits (184), Expect = 3e-36 Identities = 179/234 (76%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||| || ||||||||||| || ||||| |||||||| | || || |||| Sbjct 610764 GTGGTATGCAAATTTTCGTGAAAACCCTAACGGGAAAGACTATCACTTTGGATGTGGAGT 610823 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || |||||||| || || | || || || ||||| || || || || || || || | Sbjct 610824 CATCTGACACAATTGAAAATGTGAAGGCTAAAATTCAGGACAAAGAGGGAATCCCCCCTG 610883 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||||||| |||| ||||||||||| ||||| | || |||||| | ||| | |||| | Sbjct 610884 ATCAGCAAAGACTCATTTTTGCTGGCAAACAATTAGAGGATGGAAGAACCTTGTCTGACT 610943 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTT-CGGGGTGGT 172089 ||||| | |||||||| || || |||| |||| ||| | | || || |||||| Sbjct 610944 ACAACATCCAAAAGGAATCCACGTTACA-CTTGGTCTTACGTTTACGAGGTGGT 610996 Score = 159 bits (176), Expect = 5e-34 Identities = 175/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||| || ||||| || || || ||||| |||||||| | || || |||| Sbjct 610536 GTGGTATGCAAATTTTCGTGAAGACTCTAACGGGAAAGACTATCACTTTGGACGTGGAGT 610595 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| || || || | || ||||| ||||| || || || || || ||||| | Sbjct 610596 CATCCGACACGATTGAAAATGTGAAGGCCAAAATTCAGGACAAAGAGGGAATCCCACCTG 610655 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | || || |||| ||||||||||| ||||| | ||||||||| | ||| | |||| | Sbjct 610656 ACCAACAGAGACTCATTTTTGCTGGCAAACAATTGGAAGATGGAAGAACCTTGTCTGACT 610715 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| | |||||||| ||||| ||||| | || ||| | || | |||||| Sbjct 610716 ACAACATCCAAAAGGAATCTACATTACACTTAGTACTACGTCTCAGAGGTGGT 610768 Score = 154 bits (170), Expect = 2e-32 Identities = 174/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||| || ||||| ||||| || ||||| || ||||| | || || |||| Sbjct 610992 GTGGTATGCAAATTTTCGTGAAGACCCTAACGGGAAAGACCATCACTTTGGACGTGGAGT 611051 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| || || || | ||||| || ||||| || || || || || ||||| | Sbjct 611052 CATCCGACACGATTGAAAATGTAAAAGCGAAAATTCAGGACAAAGAGGGAATCCCACCTG 611111 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | || || |||||||||||||||| ||||| | ||||||||| | ||| | |||| | Sbjct 611112 ACCAACAGAGACTTATTTTTGCTGGCAAACAATTGGAAGATGGAAGAACCTTGTCTGACT 611171 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | ||| | |||||||| || || ||||| | || ||| | || | |||||| Sbjct 611172 ATAACATCCAAAAGGAATCCACCTTACACTTAGTACTACGTCTGAGAGGTGGT 611224 Score = 120 bits (132), Expect = 4e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 171889 GGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAG 171948 |||||||| ||||| | || || ||||| || |||||||| || || | || || || Sbjct 610340 GGAAAAACCATCACTTTGGACGTGGAGTCATCCGACACAATTGAAAATGTGAAGGCTAAA 610399 Query 171949 ATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAG 172008 ||||| || || || || || ||||| || || || |||||||||||||||| || || Sbjct 610400 ATTCAGGACAAAGAGGGAATCCCACCTGACCAACAGAGACTTATTTTTGCTGGCAAGCAA 610459 Query 172009 CTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTT 172068 | || |||||| | ||| | |||| |||||| | |||||||| || || ||||| | Sbjct 610460 TTAGAGGATGGAAGAACCTTGTCTGACTACAACATCCAAAAGGAATCCACCTTACACTTG 610519 Query 172069 GTTCTAAGGCTTCGGGGTGGT 172089 || || | | || |||||| Sbjct 610520 GTGTTACGTTTACGAGGTGGT 610540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657861100721760