Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F000725905.1_202014-07-21] 158 sequences; 27,817,468 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq10 425 4e-113 seq12 223 3e-52 seq14 120 2e-21 seq6 96.9 3e-14 >seq10 Length=1594295 Score = 425 bits (470), Expect = 4e-113 Identities = 1077/1614 (67%), Gaps = 48/1614 (3%) Strand=Plus/Plus Query 281298 TTTTCTTGTTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGAT 281357 ||||||| |||| || ||| | | || ||| || | | ||| | ||||||| | Sbjct 564377 TTTTCTTC--ATCTTCTGCTTTGTACTTTTCAGCGTCGTTCACCATACGGTCAATTTCTT 564434 Query 281358 CTTCAGAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTT----GTT 281413 || || |||||||| | ||| ||||| ||||||| || | ||||| || Sbjct 564435 CTGGGGACAATCTTCCCTTGTCATTGGTAATGGTAATAT----GGTTCTGTTTTCCCGTG 564490 Query 281414 GATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCA 281473 ||||| ||| | ||||| |||||||| |||||||| ||||| | |||||| || |||||| Sbjct 564491 GATTTTTCAACAGCAGTAACATTAAGGATACCATTAGCATCAATATCAAAGGTAACTTCA 564550 Query 281474 ATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTA 281533 ||||| ||||| |||| | || |||||||| || || | | |||| | |||| Sbjct 564551 ATTTGTGGGACTTTTCTCGGTGCTGGTGGGATACCGTCTAGGTGAAATTTACCCAACAAG 564610 Query 281534 TTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGA 281593 || || || ||||| | || || || ||| | | |||||| ||| | | ||| Sbjct 564611 TTGTTGTCCTTAGTTAGGGCTCTCTCTCCTTCGTACACTTGGATCAACACTCCTGGTTGG 564670 Query 281594 TTATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATC 281652 ||||| | ||| || || || | | || | || || || || || || ||||| || Sbjct 564671 TTATCAGCATAGGTAGTGAAGATT-TGACTCTTCTTTGCTGGGATGGTGGTATTTCTCTC 564729 Query 281653 AATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC 281712 ||| | |||||||||| || || || ||||| ||||| || || | | | ||||| Sbjct 564730 AATCAGCTTGGTCATAACTCCTCCTGCGGTTTCCAAACCGAGGGATAAGGAACACACATC 564789 Query 281713 AACTAGGACAATATTTTGAA--GTTTTTCATCAGTTTGACCA-ACAAGAATAGCTGCTTG 281769 | || | | || ||| | | || || || |||| |||| ||| |||||||| Sbjct 564790 TAAGAGCAACAAATCTTGTACCGCATTGGATTGGTC--ACCAGACAA-AATGGCTGCTTG 564846 Query 281770 AATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTT--TTA 281827 | || |||||||| ||||| ||||||||||| || | | | | || || || Sbjct 564847 TACTGCTGCACCATACGCAACGGCTTCATCAGGGTTGATGGATC--TGCAGGCTTCCTTT 564904 Query 281828 CCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACT 281887 || || || || | || ||| | | || ||||| | | || || ||||| Sbjct 564905 CCGTTAAAGAACTCCTTAATGAGTGTTTGAATTTTGGGAATTCTTGTGGAACCACCAACA 564964 Query 281888 AATACAATTTCATGCAC-CTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAAC 281946 | |||| ||| ||||| || | || |||| | | ||| || || || ||||| Sbjct 564965 AGGACAACTTCGTGCACGCTCTTCTTG-TCCATCATGGCATCTTTCAATACCTTCTCAAC 565023 Query 281947 GGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAG 282006 || || | | | || | || ||| ||||| || ||| | |||||| | | Sbjct 565024 AGGAATTAGCGTATCACGGAAGTAATCGATACAGAGTTCCTCAAATCTGGCTCTACTCAC 565083 Query 282007 AGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGA 282066 || ||| | || || || |||||||| | || |||| ||| || || | ||| || || Sbjct 565084 CGTCACACTGTAGTCGATACCTTCGAAAAGGGAGTCAATTTCGATGGTGGCTTGTGTAGA 565143 Query 282067 AGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC 282126 || |||| | ||| || || | |||||| || | || ||||| ||||||| | || Sbjct 565144 GGAGGATAAGGTACGCTTGGCTCTCTCACATTGAGTTCGTAATCTTCTTAAGGCTCT-GC 565202 Query 282127 TGATT----GATTCAAATCTGTTT---TATATTTTCTCTTGAAATCTTCAACACACCATG 282179 | ||| ||| ||||| || ||| |||||| || |||||||||||||| | Sbjct 565203 T-ATTCTTAGAT--AAATCCTTTCCTCTATTTTTTCTTTTAAAATCTTCAACACAAAAGT 565259 Query 282180 TTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTA 282239 | || | | || ||||||||||||||||| || | |||| ||| | || || | | Sbjct 565260 TCACCAACCTGTTGTCAAAATCTTCACCTCCTAAGTGCGTATCTCCAGCTGTGGCCTTCA 565319 Query 282240 CTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATAT 282299 ||| ||||| |||||| |||| | | || | ||||| ||||| || || | | Sbjct 565320 CTTCGAAAATTCCATCCTCAATCGTTAGGAGGGATACATCGAAAGTTCCTCCTCCGAGGT 565379 Query 282300 CAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAG 282359 | ||||| || | ||| |||| | | ||||| | |||||||| |||| ||||| Sbjct 565380 CGAAAATGAGGATGTTCTTTTCACCCTTTCCTTTTTTGTGCAGACCATAAGCAATAGCAG 565439 Query 282360 CAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTT 282419 | |||||||| || || |||||||||| ||||| | ||||||||| | ||||| || | Sbjct 565440 CTGCAGTTGGCTCGTTGATAATTCTCATGACATTCAAACCAGCAATAGTACCTGCGTCCT 565499 Query 282420 TAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTA 282479 | |||||||| ||||||||||| |||||||| || || || ||||| || |||| | ||| Sbjct 565500 TCGTGGCTTGCCTTTGTGAATCATTAAAATAAGCTGGCACGGTAATGACTGCATTTTTTA 565559 Query 282480 CTTCTTTTCCAATATAAGCGCT--TGCTGTTTGTTTCATTTTACTTAAAATCATTGATGA 282537 ||||| || || |||| ||| ||| |||||| || |||| ||| || || Sbjct 565560 TGGACTTTCC--TAAAAACGCTTCTGCATTTTCTTTCATCTTTTGCAAAACCATGGAAGA 565617 Query 282538 AATTTGTTCTGG--AGAAT-ATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGG 282594 |||| ||| || |||| ||| ||| || ||||| ||||| |||| || Sbjct 565618 GATTTCTTCAGGGTGGAATAATTTCTT---CTCTCCCTGATAGGATACCTCAATCATGGG 565674 Query 282595 TTTATTACCAACA---TTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACT 282651 || | | ||||| | || |||||||||| | ||||||||| || ||| Sbjct 565675 CTTCTCATCAACACCGGACTTGACAGTAAATGGCCAGTGTTTCATATCGCTCTGCACAGA 565734 Query 282652 TTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATT 282711 ||| | || | || |||||||| | ||||||||||||| ||| || ||| || Sbjct 565735 AGATTCAGTGAACTTCCTTCCAATTAACCTCTTTGCATCAAAAACAGTGTTCTCTGGGTT 565794 Query 282712 AACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAAC 282771 ||| |||| | || || ||||||||||| || || || || || || | ||| Sbjct 565795 CCTTGCCACTTGGTTCTTAGCGGCATCTCCAATTAGCCTCTCCGTGTCAGTGAAGGCAAC 565854 Query 282772 ATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTG 282831 || |||||||| || | || || || ||||| ||||| || || || || | ||| Sbjct 565855 GTAAGATGGAGTGGTTCTGTTTCCCTGGTCATTGGCAATGATATCTACATTTTCGTTTCT 565914 Query 282832 CCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCAATTTT 282885 |||||| || || || | | || || || | |||||||| || || || || Sbjct 565915 CCATACTCCGACGCAGGAATAGGTGGTACCAAGGTCAATACCGATGGCGATGTT 565968 >seq12 Length=1585989 Score = 223 bits (246), Expect = 3e-52 Identities = 1037/1601 (65%), Gaps = 69/1601 (4%) Strand=Plus/Minus Query 281303 TTGTTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCA 281362 || ||||| | || |||||| || || || |||||||| | || ||||| |||| Sbjct 745907 TTCTTATCCTCATCGGCAAATTTTTCTGCATCGTTAATCATTTTTTCGATTTGTTCTTTG 745848 Query 281363 GAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCA 281422 || | |||||| || ||| ||||| ||||| ||| ||| ||| |||||| Sbjct 745847 GACAGTCTTCCTTTATCATTGGTAATTGTAATTCCCTTACTTTTTCCTGTACCTTTATCT 745788 Query 281423 GCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGG 281482 | || || | || |||||||| ||| | || || |||||||||| ||| Sbjct 745787 TCCGCTTCTACGTGGAGGATACCATTTTTATCTACTGTGAAGGTCACTTCAATTTTGGGG 745728 Query 281483 ACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCT 281542 || |||||||| || |||||||| ||| | | ||| |||| | | | ||||| Sbjct 745727 ACACCTCTCTGTGCTGGTGGGATTCCTGAAAGTTCGAATTTTCCTAAAAGGTGGTTATCC 745668 Query 281543 TTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATCT 281599 || || ||| || |||||| || |||| |||||| |||| |||| | || || ||| Sbjct 745667 TTGGTTAATGCTCTTTCACCTTCAAAAACTTGGAT--TAAC-ACAGCTGGTTGGTTGTCT 745611 Query 281600 GAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAAT 281658 || || | ||| |||| || || || ||||| ||| ||||| | ||| | Sbjct 745610 TGGTAGGTAGAAAAGG-TCTGTGACTTCTTCGTTGGAATAACTGTATTTCTTTTAATCAG 745552 Query 281659 ATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAG 281718 | |||||| ||||| ||| | ||||||| ||| | | || ||||| ||||| | || Sbjct 745551 TTGGGTCATGATACCTCCAACGGTTTCTATACCTAAGGTTAGTGGAGTAACATCTAGCAG 745492 Query 281719 GACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGC 281778 || | || ||| | || ||| || |||| || ||| | || ||||| ||||| Sbjct 745491 AACCACATCTTGCAATTCTTC-TC-------CCAA-AATAATTCCCGCCTGAATGGCAGC 745441 Query 281779 ACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAA 281838 ||| ||||| || |||||||| || |||| | | |||| ||| |||||| |||||||| Sbjct 745440 ACCGTATGCTACTGCTTCATCTGGGTTAATACCTCTATTTGGTTCTTTACCGTTGAAAAA 745381 Query 281839 ATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 281898 | | | || |||| | || || ||||||| |||||||| |||| || ||||| Sbjct 745380 TTCTTTTATAATTTGTTGAATTTTGGGGATACGAGTAGATCCTCCTACTAGAACGATTTC 745321 Query 281899 ATGCACCTGTGATTTATCCAG-TTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGAC 281957 || | | || | | | || ||||| || || || || | |||||||| | | Sbjct 745320 ATCGATTT-TGCTCTTTTCATATTTTGCGTCATCTAGTACCTTCTTTACGGGTTCTAAAG 745262 Query 281958 CAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTAT 282017 ||||||| ||||| | | |||||| || || ||||| || | || || | Sbjct 745261 TTTCTCTAAATAAGTCATCATTCAATTCTTCAAACTTGGCTCTCGTCAAGGTCTCAG-AG 745203 Query 282018 AATCAAT-TCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA-AGATAG 282075 || | || |||||| | | |||| |||||| || |||| | | ||||| Sbjct 745202 AAACTATGTCCTTCTACGATGTCTTCAATCTCAATCTGTGTA-GAGTGCACTACAGATAA 745144 Query 282076 TGCACGTTTAGCACGTTC-ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT-GA 282133 | || ||| ||| || | || || | | | || | | |||| | || || || Sbjct 745143 ATTTCTCTTTGCAATTTCGACTTCCTTTCTTAACTTTTGG-ATGGCTCT--CTTATCAGA 745087 Query 282134 T-TCAAATCTGTTTTATATTTTCT-CTTGAAATCTTCAACACACCATGTTACAAGACGAT 282191 | | |||||| | || | | |||| ||| ||| || | | | || | || || | Sbjct 745086 TCTTAAATCTATGTT-TGTCTTCTTCTTAAAAATTTTGATAAA--ATAATCCATAACTCT 745030 Query 282192 T--ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 282249 | ||| || || || ||||| || | |||||||||| ||| || || | || | Sbjct 745029 TTGATCGAAGTCCTCTCCTCCTAAATGGGTATTTCCTGCCGTGGCGTAAACCTCAAACAC 744970 Query 282250 TCCATCTTCAAGAGACAAAAGAGTA-ACATCATGGGTTCCACCACCCATATCAAAAATAA 282308 |||| || | ||| ||| | | ||||| ||||| || || | ||| | | | Sbjct 744969 ACCATTGTCGAT-GACTAAAATGGACACATCGAAAGTTCCTCCTCCTAAATCGTAGACCA 744911 Query 282309 GTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 282368 | || | ||| ||| || || || | ||| || || ||||| || ||||||| Sbjct 744910 --AAATGCTCGTCT----CTTCCTTCTTGTCCAAACCGTAAGCCAAAGCTGCTGCAGTTG 744857 Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428 ||||||| ||||| | | || || | ||| ||||| ||||||| || || || |||| Sbjct 744856 GTTCATTTATAATACGAACAATGTTTAAACCTGCAATGGTTCCTGCGTCCTTTGTTGCTT 744797 Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTC 282488 |||| |||| ||| || || || || || || || | ||| || | | | ||| |||| Sbjct 744796 GTCTCTGTGCATCATTGAAGTAGGCTGGTACTGTTACAACTGCGTTTTTAACTGGCTTTC 744737 Query 282489 CAATATAAGCGCTTG--CTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTC 282546 | | | ||| | ||| || ||| ||||||||| |||| ||| | |||||||| Sbjct 744736 CCAAA-AAG-GATTGAGCTATTTCTTTCATTTTTTCCAAAACCATGGCACTGATTTGTTC 744679 Query 282547 TGGAGAATATTGCTTGGATTCAT---TTTGATATGATACTTCAAAATATGG-TTTATTAC 282602 ||| | | | | | | ||| | || || || |||| | || ||| ||| | | Sbjct 744678 TGGCGCAAA--GGTCGTCTTCTTATCCTTTATCTG-TACTCTTATATTTGGCTTTCCTTC 744622 Query 282603 CAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTT--TGGTCATT 282660 | || | || || ||||| | | || ||||| || | |||| ||||| | Sbjct 744621 C-TGGTTTACAATTTCGTATGGCAATAAAGTCCTATCT--TTCACAACTTCCTGGTCGTC 744565 Query 282661 AAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGC 282720 ||| | ||| || || |||||||| |||| || | || | || || | | | || Sbjct 744564 AAACTTTCTTCCTATCAATCGTTTCACATCGAATACTGTCTGTGTGGGGTGTAGGGTGGC 744505 Query 282721 TTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGT----AAATGAAACATATG 282776 || |||| ||||| ||||| | | | || |||| || ||||| ||||| | Sbjct 744504 TTCCAATTTAGCTGCTTCTCCCA----CTTTCCTTTCTCCGTCCACGAATGACACATAGG 744449 Query 282777 ATGGAGTTGTGCGATTACCTTGATCATT-CGCAATAATTTCAACTTTACCATTTTGCCAT 282835 |||| || | || || || ||||| |||| ||||| ||| | ||||||| | Sbjct 744448 ATGGCGTGATACGGTTTCCCAACTCATTGTTCAAT-ATTTCGACTCTGCCATTTTTGAAA 744390 Query 282836 ACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAAT 282876 ||||| || ||||| |||| || ||||| ||||| || || Sbjct 744389 ACACCAACGCAACTGTAAGTCGTACCTAAGTCAATTCCGAT 744349 Score = 104 bits (114), Expect = 2e-16 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 86116 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 86175 |||||||| || | ||||||||||||||||||||| || || || || | |||||| Sbjct 744884 AAACCGTAAGCCAAAGCTGCTGCAGTTGGTTCATTTATAATACGAACAATGTTTAAACCT 744825 Query 86176 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 86235 ||||| | | | || ||||||||||||||||| ||||| || || |||||||| Sbjct 744824 GCAATGGTTCCTGCGTCCTTTGTTGCTTGTCTCTGTGCATCATTGAAGTAGGCTGGTACT 744765 Query 86236 GTAATAACTGCTTTATTAATAGGTTTT 86262 || | |||||| || |||| || ||| Sbjct 744764 GTTACAACTGCGTTTTTAACTGGCTTT 744738 >seq14 Length=2283415 Score = 120 bits (132), Expect = 2e-21 Identities = 132/176 (75%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||| | || ||||| || || ||||| || |||||||||| | |||| | ||| ||| Sbjct 1528668 CCAAATGCTAAAGCCGCTGCGGTTGGCTCGTTAATAATTCGAAGCACATCCAAACCTGCA 1528609 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 ||| ||||||| || || |||||||| ||||||||||| |||||||| ||||| || || Sbjct 1528608 ATTTTTCCTGCGTCCTTCGTGGCTTGCCTTTGTGAATCATTAAAATAAGCAGGTACTGTG 1528549 Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTT 282519 ||||| || | ||||| |||| | |||| ||||||| ||||||||| Sbjct 1528548 ATAACAGCTTGATGTACTTTCCTTCCCAAATAATTCTCAGCTGTTTCTTTCATTTT 1528493 Score = 93.3 bits (102), Expect = 3e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 86111 TTCCTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTA 86170 || |||| || |||| | ||| ||||| ||||| || ||||| ||| ||| ||||| | Sbjct 1528676 TTTCTAACCCAAATGCTAAAGCCGCTGCGGTTGGCTCGTTAATAATTCGAAGCACATCCA 1528617 Query 86171 AACCCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTG 86230 |||| |||||||| | | || || ||||| || |||| ||||||||||| || | Sbjct 1528616 AACCTGCAATTTTTCCTGCGTCCTTCGTGGCTTGCCTTTGTGAATCATTAAAATAAGCAG 1528557 Query 86231 GTACAGTAATAACTGCTTTAT 86251 |||| || ||||| |||| || Sbjct 1528556 GTACTGTGATAACAGCTTGAT 1528536 Score = 91.5 bits (100), Expect = 1e-12 Identities = 247/376 (66%), Gaps = 14/376 (4%) Strand=Plus/Minus Query 281435 TTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGA 281494 |||| ||| | || || || | |||||| |||||||||||||| ||||| ||||| | Sbjct 1529568 TTAATAATCGCGTTTGCGTCTACATCAAAGGTGACTTCAATTTGTGGGACTCCTCTAGGT 1529509 Query 281495 GCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTT 281554 ||||| || || || | |||| |||| ||| | | ||||| || | | || | Sbjct 1529508 GCAGGGGGAATTCCCACTAAATCGAATGATCCTAACATTTTATTGTCGCACGCCATTTCT 1529449 Query 281555 CGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAAT 281614 | ||| || | ||| | || |||| | || ||||| || || | || | |||| Sbjct 1529448 CTTTCTCCTTGGAATACTTTGATACTCACCTGTGTTTGGTTGTCAGCTGCGGTGGAAAAT 1529389 Query 281615 ACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACC 281673 | |||| || || || || || || |||||||| | || | ||||| | | || Sbjct 1529388 A-TCTGCGACTTCTTCGTCGGGATAGTGGTGTTTCTGTTGATCAATTTGGTGAAGACTCC 1529330 Query 281674 ACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAG 281733 ||| ||||||| ||||||||| || ||| | ||||| | ||| | | || || Sbjct 1529329 ACCTAGGGTTTCTATACCAAGAGATAGGGGAATTACATCTAGTAGAAGCAAATCTT---- 1529274 Query 281734 TTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGC 281793 || || || ||| || | || | || ||||| ||||| | ||||| || Sbjct 1529273 TTATTTCTCCTTTT--------AGTACTCCTCCCTGGATAGCTGCACCTAACGCAACTGC 1529222 Query 281794 TTCATCAGGATTAACA 281809 ||||||||| || ||| Sbjct 1529221 TTCATCAGGGTTGACA 1529206 >seq6 Length=3498471 Score = 96.9 bits (106), Expect = 3e-14 Identities = 134/185 (72%), Gaps = 11/185 (6%) Strand=Plus/Minus Query 637117 AAAATTATTG-TCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTT 637175 |||| | ||| |||||| ||||| ||||||||||| |||||||||||| |||||||||| Sbjct 1934758 AAAAGTGTTGGTCGATTTCTCTTCCCCAAATATTGCCAAAGAAATGCATGTTGGACATTT 1934699 Query 637176 AAGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAA-----ATGTGTGGACAC 637230 ||||||||| || | || || || |||| | || ||| | |||||| || Sbjct 1934698 AAGATCAACCATATTAGGAGACAGCATATGTAAAATTTTCGAATTCCTAAATGTGGAAAC 1934639 Query 637231 GATGTTTATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCT 637290 | ||| ||| |||||| | ||||| ||||| || ||||| || ||| | || | Sbjct 1934638 ---GGTTAGGGTA--AATCATATTGGTGACTGGGGTACACAATTTGGAATGATCATAAAT 1934584 Query 637291 TATAT 637295 ||||| Sbjct 1934583 TATAT 1934579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740622642867708