Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F000725905.1_202014-07-21] 158 sequences; 27,817,468 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq62 109 5e-19 >seq62 Length=53519 Score = 109 bits (120), Expect = 5e-19 Identities = 151/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATC-GCC-CATCGTGGACGAGTCCTCGA 133512 || || | ||||||||| ||||| || ||||| || ||| || ||| ||||| | Sbjct 26281 AAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGCCACAAACCTGACA--TCCTCCA 26338 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 |||||| || | || || |||| ||||||||| || ||||| |||||||| || | Sbjct 26339 ACTGCTTTCCTGAATATATTAGCCTCTGCTGGTCAGGTGGGATTCCTTCCTTATCCTCAA 26398 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 | ||| ||| | | | || ||| |||| | |||||| || | ||||| |||||| | Sbjct 26399 TTTTTGACTTAACATTCCTAATCGTTTCGGATGCCTCCACATCCAGGGTGATGGTTTTTC 26458 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| | ||||||||||| |||||||| Sbjct 26459 CGGTTAATGTTTTTACGAATATCTGCAT 26486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419845243920