Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F000725905.1_202014-07-21] 158 sequences; 27,817,468 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 3e-15 >seq5 Length=2463301 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || ||||| |||| ||||| | ||||| | || || || | || | Sbjct 610769 ATGCAAATTTTCGTGAAAACCCTAACGGGAAAGACTATCACTTTGGATGTGGA-GTCATC 610827 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || || || | || || |||||| || |||||||| || || || ||||| Sbjct 610828 TGACACAATTGAAAATGTGAAGGCTAAAATTCAGGACAAAGAGGGAATCCCCCCTGATCA 610887 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGATTAC 25351 |||||||||||||| | ||||||||| | || |||| |||| |||| || ||| Sbjct 610888 GCAAAGACTCATTTTTGCTGGCAAACAATTAGAGGATGGAAGAACCTTGTC--TGACTAC 610945 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || || ||||| |||||||| | || || || ||| | || |||| || Sbjct 610946 AACATCCAAAAGGAATCCACGTTACACTTGGTCTTACGTTTACGAGGTGG 610995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445093520938560