Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F000725905.1_202014-07-21] 158 sequences; 27,817,468 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq10 392 1e-103 seq12 190 6e-43 seq5 176 1e-38 seq14 98.7 3e-15 seq8 96.9 1e-14 >seq10 Length=1594295 Score = 392 bits (434), Expect = 1e-103 Identities = 978/1478 (66%), Gaps = 13/1478 (1%) Strand=Plus/Minus Query 349198 CGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCG 349257 ||| || || || || | ||||| || ||||| || || | || ||| ||| || Sbjct 565963 CGCCATCGGTATTGACCTTGGTACCACCTATTCCTGCGTCGGAGTATGGAGAAACGAAAA 565904 Query 349258 TGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTAC 349317 |||||| || ||||| ||||| || || |||||||| || ||||| |||||||| || || Sbjct 565903 TGTAGATATCATTGCCAATGACCAGGGAAACAGAACCACTCCATCTTACGTTGCCTTCAC 565844 Query 349318 CGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAA 349377 || || ||| | | ||||| ||| | || || || |||| || || ||| | || Sbjct 565843 TGACACGGAGAGGCTAATTGGAGATGCCGCTAAGAACCAAGTGGCAAGGAACCCAGAGAA 565784 Query 349378 TACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATC 349437 || ||||||||||| ||| | | ||||| || | || |||| ||| || Sbjct 565783 CACTGTTTTTGATGCAAAGAGGTTAATTGGAAGGAAGTTCACTGAATCTTCTGTGCAGAG 565724 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497 ||| | ||||| | || |||||||| | | | ||| || || || ||||| Sbjct 565723 CGATATGAAACACTGGCCATTTACTGTCAAGTCCGGTGTTGATGAGAAGCCCATGATTGA 565664 Query 349498 GGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTT 349557 ||| ||| | || || | ||| ||| || |||||||| || || |||||||| Sbjct 565663 GGTATCCTATCAGGGAGAGAAGAAATTATTCCACCCTGAAGAAATCTCTTCCATGGTTTT 565604 Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617 || ||||| |||| ||| ||||| | |||||| | | ||| |||| || || Sbjct 565603 GCAAAAGATGAAAGAAAATGCAGAAGCGTTTTTAGGAAAGTCCATAAAAAATGCAGTCAT 565544 Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 ||| || ||||| |||||||||||| | || | || || || || || || | || Sbjct 565543 TACCGTGCCAGCTTATTTTAATGATTCACAAAGGCAAGCCACGAAGGACGCAGGTACTAT 565484 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 ||| || || ||||| | ||||| || || || || ||||| || || ||||| ||||| Sbjct 565483 TGCTGGTTTGAATGTCATGAGAATTATCAACGAGCCAACTGCAGCTGCTATTGCTTATGG 565424 Query 349738 GCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797 || | |||| | | ||||| || || || ||||| || | || || || || Sbjct 565423 TCTGCACAAAAAAGGAAAGGGTGAAAAGAACATCCTCATTTTCGACCTCGGAGGAGGAAC 565364 Query 349798 TTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGG 349857 ||| |||||||| || ||||| |||| || |||||||| ||||| || || || ||||| Sbjct 565363 TTTCGATGTATCCCTCCTAACGATTGAGGATGGAATTTTCGAAGTGAAGGCCACAGCTGG 565304 Query 349858 TGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGA 349917 ||||| || | || || ||||||||||| || | | || || |||| |||| Sbjct 565303 AGATACGCACTTAGGAGGTGAAGATTTTGACAACAGGTTGGTGAACTTTTGTGTTGAAGA 565244 Query 349918 ATTTAAGCGTCAAGCTA---AAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCT 349974 ||||| | || || || ||| | | ||| ||||| | | | | Sbjct 565243 TTTTAAAAGAAAAAATAGAGGAAAGGATTTATCTAAGAATAGCAGAGCCTTAAGAAGATT 565184 Query 349975 AAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGA 350034 | ||||| ||||| | || |||||| ||||||| || |||| ||| || | || || Sbjct 565183 ACGAACTCAATGTGAGAGAGCCAAGCGTACCTTATCCTCCTCTACACAAGCCACCATCGA 565124 Query 350035 AATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGA 350094 |||||| || ||| || || | || | | | | | | | || | ||||| Sbjct 565123 AATTGACTCCCTTTTCGAAGGTATCGACTACAGTGTGACGGTGAGTAGAGCCAGATTTGA 565064 Query 350095 AGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGA 350154 ||| | ||||| ||| || | | || | |||||| || || ||||| ||||| Sbjct 565063 GGAACTCTGTATCGATTACTTCCGTGATACGCTAATTCCTGTTGAGAAGGTATTGAAAGA 565004 Query 350155 TGCAAAAATGTCCAAAAATCAGATTG-ATGAAGTAGTTTTAGTTGGTGGTTCTACACGTA 350213 ||| | ||| ||| || || || | ||||| || | ||||||||||| ||| | | Sbjct 565003 TGCCATGATGGACAAGAA-GAGCGTGCACGAAGTTGTCCTTGTTGGTGGTTCCACAAGAA 564945 Query 350214 TTCCAAAAGTTC-AACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCA 350272 |||| ||| ||| |||| | | || ||||| ||||| || || ||| | | ||||| Sbjct 564944 TTCCCAAAATTCAAACACTCATTA-AGGAGTTCTTTAACGGAAAGGAAGCCTGCAGATCC 564886 Query 350273 ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGA 350332 || || || |||||||| ||||| |||||||| || || || ||| | ||||| ||||| Sbjct 564885 ATCAACCCTGATGAAGCCGTTGCGTATGGTGCAGCAGTACAAGCAGCCATTTTGTCTGG- 564827 Query 350333 AATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTT 350389 | | || || | | ||| | || || ||||||| | | | || || Sbjct 564826 --TGACCAATCCAATGCGGTACAAGATTTGTTGCTCTTAGATGTGTGTTCCTTATCCCTC 564769 Query 350390 GGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCT 350449 || || ||||| | || | ||| ||||| || ||| ||||||| || | || Sbjct 564768 GGTTTGGAAACCGCAGGAGGAGTTATGACCAAGCTGATTGAGAGAAATACCACCATCCCA 564709 Query 350450 ACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAA 350509 |||| ||| |||| || |||| | ||| ||||| || |||| || || ||| Sbjct 564708 GCAAAGAAGAGTCAAATCTTCACTACCTATGCTGATAACCAACCAGGAGTGTTGATCCAA 564649 Query 350510 GTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTA 350569 || | ||||| || | || | ||||| || || || | || ||||| |||| Sbjct 564648 GTGTACGAAGGAGAGAGAGCCCTAACTAAGGACAACAACTTGTTGGGTAAATTTCACCTA 564589 Query 350570 AGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGAT 350629 | || |||||| || ||| ||| || || |||||||| | || ||||||||| Sbjct 564588 GACGGTATCCCACCAGCACCGAGAAAAGTCCCACAAATTGAAGTTACCTTTGATATTGAT 564529 Query 350630 TCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATC 350667 | |||||||| | |||||||| || ||||||||||| Sbjct 564528 GCTAATGGTATCCTTAATGTTACTGCTGTTGAAAAATC 564491 Score = 255 bits (282), Expect = 2e-62 Identities = 685/1032 (66%), Gaps = 23/1032 (2%) Strand=Plus/Plus Query 182763 TTTTTAGCCTCAATACTTCCTTTAAATTCCTCATCTTCT--TTAGCATACTTTTCAGCAT 182820 ||| | || ||||| || ||| ||| ||||||||| || | ||||||||||| | Sbjct 564353 TTTCTGGCTTCAATTCTCTTCTTATTTTCTTCATCTTCTGCTTTG--TACTTTTCAGCGT 564410 Query 182821 CCATTGTCATTCTTTCTATTTCATCTTTAGA-AAGATGACCTGCATCATTTGTAAT--TA 182877 | | ||| | || ||||| ||| || || | ||| ||||| ||||| || Sbjct 564411 CGTTCACCATACGGTCAATTTCTTCTGGGGACAATCTTCCCTTG-TCATTGGTAATGGTA 564469 Query 182878 CTACATTACTAGTTACTCCAGTTGATTTTTCAAGTGCGCTAACATTTAAAATACCATTAG 182937 || | || || ||| || |||||||||| || ||||||| | |||||||||| Sbjct 564470 ATATGGTTCTGTTT--TCCCGTGGATTTTTCAACAGCAGTAACATTAAGGATACCATTAG 564527 Query 182938 AGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGTGGCATTGGTGGAATTCCAG 182997 |||| |||||| | |||||||| ||||| || || || |||||| || || | Sbjct 564528 CATCAATATCAAAGGTAACTTCAATTTGTGGGACTTTTCTCGGTGCTGGTGGGATACC-G 564586 Query 182998 TTAAAGT-AAATTCACCTAATTTATTATTATCTTTAGTTCTTGCTCTCTCGCCTTCATAT 183056 | | || ||||| ||| || || || || |||||| |||||||| ||||| || Sbjct 564587 TCTAGGTGAAATTTACCCAACAAGTTGTTGTCCTTAGTTAGGGCTCTCTCTCCTTCGTAC 564646 Query 183057 ACTTGAATAGTAACTGCTGGCTGATTATCACTATAAGTAGAAAAAACTTGCTTTTTATTA 183116 ||||| || ||| |||| || |||||| ||| |||| || | ||| | || || Sbjct 564647 ACTTGGATCAACACTCCTGGTTGGTTATCAGCATAGGTAGTGAAGATTTGACTCTTCTTT 564706 Query 183117 ATAGGAATAGTTGAATTTCGCGGAACAATTACAGTCATTACTTCTCTGGCAGTTTCTAAT 183176 || || || | ||||| | || | ||||| ||| ||| || ||||| || Sbjct 564707 GCTGGGATGGTGGTATTTCTCTCAATCAGCTTGGTCATAACTCCTCCTGCGGTTTCCAAA 564766 Query 183177 CCTAATGATAATGGTGCTACATCTAGTAATAATAAATCTGATGTTTTATCTGATTTAATA 183236 || | ||||| | ||||||| | || |||||| | || |||| | Sbjct 564767 CCGAGGGATAAGGAACACACATCTAAGAGCAACAAATCTTGTACCGCATTGGATTGGTCA 564826 Query 183237 TCACTTAAAATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATT 183296 || ||||| || ||||| || ||||||||||| ||||| |||||||| ||||| || Sbjct 564827 CCAGACAAAATGGCTGCTTGTACTGCTGCACCATACGCAACGGCTTCATCAGGGTTGATG 564886 Query 183297 GAACGAGATAATTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATT 183356 || | | ||| || || ||||| || || || | | ||||||||| |||||| Sbjct 564887 GATCTGCAGGCTTCCTTTCCGTTAAAGAACTCCTTAATGAGTGTTTGAATTTTGGGAATT 564946 Query 183357 CTAGTTGAACCACCGACTAATACTACTTCAT---CGATATTACTTTTACTAATTTGTGAA 183413 || || |||||||| || | || ||||| | || | || ||| | | || | | Sbjct 564947 CTTGTGGAACCACCAACAAGGACAACTTCGTGCACGCTCTT-CTTGTCC--ATCATGGCA 565003 Query 183414 TCTTTTAAAACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCT 183473 ||||| || || || |||||||| | || | | || |||| ||||| | || Sbjct 565004 TCTTTCAATACCTTCTCAACAGGAATTAGCGTATCACGGAAGTAATCGATACAGAGTTCC 565063 Query 183474 TCTAATCTTGCTCTAGTTAAAGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATT 183533 || ||||| |||||| | | | | |||| ||||| | | | ||| |||||| Sbjct 565064 TCAAATCTGGCTCTACTCACCGTCACACTGTAGTCGATACCTTCGAAAAGGGAGTCAATT 565123 Query 183534 TCAATCGATGTTTGTGTAGATGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTT 183593 || || | | ||||||||| || ||||| || | || |||| |||||| |||| | Sbjct 565124 TCGATGGTGGCTTGTGTAGAGGAGGATAAGGTACGCTTGGCTCTCTCACATTGAGTTCGT 565183 Query 183594 AGTCGACGTAATGATCTTGGATTATCTGTAATATC---TTGTTTATGTTTTCTTTTAAAT 183650 | || | ||| | ||| ||| | | | ||| | | ||| |||||||||||| Sbjct 565184 AATCTTCTTAAGGCTCTGCTATTCTTAGATAAATCCTTTCCTCTATTTTTTCTTTTAAAA 565243 Query 183651 TCAGTAATA-AAATGTTGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATC 183709 || || | ||| ||| | || || | |||||||||||||| ||||| || ||||| Sbjct 565244 TCTTCAACACAAAAGTT-CACCAACCTGTTGTCAAAATCTTCACCTCCTAAGTGCGTATC 565302 Query 183710 GCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAAAATTGATACATCAAA 183769 ||||| || || || ||||| || ||||| || ||||| ||| | |||||||| || Sbjct 565303 TCCAGCTGTGGCCTTCACTTCGAAAATTCCATCCTCAATCGTTAGGAGGGATACATCGAA 565362 Query 183770 TGTACCACCACC 183781 || || || || Sbjct 565363 AGTTCCTCCTCC 565374 >seq12 Length=1585989 Score = 190 bits (210), Expect = 6e-43 Identities = 801/1248 (64%), Gaps = 35/1248 (3%) Strand=Plus/Plus Query 349550 ATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGAT 349609 |||||||| | |||||||| ||||| ||| || | | ||| || | |||| | | Sbjct 744694 ATGGTTTTGGAAAAAATGAAAGAAATAGCTCAATCCTTTTTGGGAAAGCCAGTTAAAAAC 744753 Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 || ||| | || ||||||||||| || |||||||| ||| | |||||||| || || Sbjct 744754 GCAGTTGTAACAGTACCAGCCTACTTCAATGATGCACAGAGACAAGCAACAAAGGACGCA 744813 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || | |||||| || ||||| || | | || || |||||||| ||||| ||||| | Sbjct 744814 GGAACCATTGCAGGTTTAAACATTGTTCGTATTATAAATGAACCAACTGCAGCAGCTTTG 744873 Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || || | || || | | |||| | | ||| | | | |||||||| Sbjct 744874 GCTTACGGTTTGGACAAGAAGG------AAGAGACGAGCATTTTGGTCTACGATTTAGGA 744927 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 || || ||||| ||||| || | || | || | || | ||||| ||| | || Sbjct 744928 GGAGGAACTTTCGATGTGTCCATTTTAGTCATCGACAATGGTGTGTTTGAGGTTTACGCC 744987 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCG---TCTCGTTTCGCAT 349906 || || || |||| ||| | || ||||| || || ||| | | | | | || || Sbjct 744988 ACGGCAGGAAATACCCATTTAGGAGGAGAGGACTTCGATCAAAGAGTTATGGATT---AT 745044 Query 349907 TTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATG 349966 ||| | ||| |||||| | | || || ||| | || | || ||||| || Sbjct 745045 TTTATCAAAATTTTTAAGAAGAAGACAAACATAGATTTAAGATCTGATAAGAGAGCCATC 745104 Query 349967 CGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACC 350026 | |||||| | ||| ||| ||| | ||||| | || | | | | Sbjct 745105 CAAAAGTTAAGAAAGGAAGTCGAAATTGCAAAGAGAAATTTATC-TGTAGTGCACTCTAC 745163 Query 350027 TCT-ATTGAAATTGATTCTCTTGCTGATGG-CAAAGATTTCTTTTCATCTATTACACGTG 350084 | ||||| ||||| | | || || || || ||||| | | | || | | Sbjct 745164 ACAGATTGAGATTGAAGACATCGTAGAAGGACATAG-TTTCTCTGAGACCTTGACGAGAG 745222 Query 350085 CTCGGTTTGAAGAATTATGTATG--GATCTTTTTAGAGCAACAATGGATCCTGTGGAAAA 350142 | |||||||||||| | ||| || | ||||||| ||| | || || || | || Sbjct 745223 CCAAGTTTGAAGAATT--GAATGATGACTTATTTAGAGAAACTTTAGAACCCGTAAAGAA 745280 Query 350143 AGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATT-GATGAAGTAGTTTTAGTTGGTG 350201 ||| || | || |||||| | | ||| | || | | |||||| | ||| |||| || | Sbjct 745281 GGTACTAGATGACGCAAAA-TATGAAAAGAGCAAAATCGATGAAATCGTTCTAGTAGGAG 745339 Query 350202 GTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC 350261 | ||||| ||||| || ||| ||||||| | || || ||||| || || ||||||| Sbjct 745340 GATCTACTCGTATCCCCAAAATTCAACAAATTATAAAAGAATTTTTCAACGGTAAAGAAC 745399 Query 350262 CTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTA 350321 | |||| ||||| ||||||||||| || ||||| |||||||| ||||||| | Sbjct 745400 CAAATAGAGGTATTAACCCAGATGAAGCAGTAGCATACGGTGCTGCCATTCAGGCGGGAA 745459 Query 350322 TTTTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCAC 350381 |||| | | | |||| || || ||| | | || |||||||| ||||||| Sbjct 745460 --TTATTTTGGGAGAAGAATTGCAA-------GATGTGGTTCTGCTAGATGTTACTCCAC 745510 Query 350382 TTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTA 350441 | | | || ||||||| ||| | | ||||| || ||| ||||||| Sbjct 745511 TAACCTTAGGTATAGAAACCGTTGGAGGTATCATGACCCAACTGATTAAAAGAAATACAG 745570 Query 350442 CTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAA 350501 | | || || || ||||| || || |||||||| | ||| || || ||||| || Sbjct 745571 TTATTCCAACGAAGAAGTCACAGACCTTTTCTACCTACCAAGACAACCAACCAGCTGTGT 745630 Query 350502 CAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAAT 350561 ||| ||||| |||||||||||| | || || || ||||| | | ||| ||| Sbjct 745631 TAATCCAAGTTTTTGAAGGTGAAAGAGCATTAACCAAGGATAACCACCTTTTAGGAAAAT 745690 Query 350562 TTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCG 350621 | || | ||| |||||| | ||||| || || | |||||||| | ||| Sbjct 745691 TCGAACTTTCAGGAATCCCACCAGCACAGAGAGGTGTCCCCAAAATTGAAGTGACCTTCA 745750 Query 350622 ATATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAAAGT- 350680 | ||| ||||||||| | | || || | || ||| | || |||||| Sbjct 745751 CAGTAGATAAAAATGGTATCCTCCACGTAGAAGCGGAAGATAAAGGTACAGGAAAAAGTA 745810 Query 350681 AGTAAGGTAGAAATTACTAATGATAAATCTAGACTTTCAAAAGAAGATATTGAGAAAATG 350740 || | || |||||| ||||||||| ||||| || |||||| | || || |||||| Sbjct 745811 AGGGAATTA-CAATTACCAATGATAAAGGAAGACTGTCCAAAGAACAAATCGAAAAAATG 745869 Query 350741 ACACAAGATGCCGAATCATATGCTAAGGAAGATGAAGAATTTA-GAGA 350787 | | ||||| ||| || ||| | || ||| |||||| || |||| Sbjct 745870 ATTAACGATGCAGAAAAATTTGCCGATGAGGAT-AAGAATCTACGAGA 745916 Score = 131 bits (144), Expect = 5e-25 Identities = 679/1051 (65%), Gaps = 43/1051 (4%) Strand=Plus/Minus Query 182754 TCAAGATTATTTTTAGCCTCAATACTTCCTT-TAAATTCCTCATCTTCTTTAGCATACTT 182812 ||||| || ||||| || || | || || || |||| | ||| || | ||| | || Sbjct 745943 TCAAGGTTGTTTTTCGCTTCTACTTTTTCTCGTAGATTCTT-ATCCTCATCGGCAAATTT 745885 Query 182813 TTCAGCATCCATTGTCATTCTTTCTATTTCATCTTTAGAAAGATGACCTGCATCATTTGT 182872 ||| ||||| | ||||| |||| |||| ||||| || || ||| |||||| || Sbjct 745884 TTCTGCATCGTTAATCATTTTTTCGATTTGTTCTTTGGACAGTCTTCCTTTATCATTGGT 745825 Query 182873 AATTACTACATTAC--TAGTTACTCCAGTTGATTTTTCAAGTGCGCTA--ACATTTAAAA 182928 |||| || ||| | || || ||| || ||| || | |||| || | | | Sbjct 745824 AATTG-TA-ATTCCCTTACTTTTTCCTGTACCTTTATCT--TCCGCTTCTACGTGGAGGA 745769 Query 182929 TACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGTGGCATTGGTG 182988 ||||||| || || || | |||||||| | || ||||||| | ||||| Sbjct 745768 TACCATTTTTATCTACTGTGAAGGTCACTTCAATTTTGGGGACACCTCTCTGTGCTGGTG 745709 Query 182989 GAATTCCAGTTAAAGTA--AATTCACCTAATTTATTATTATCTTTAGTTCTTGCTCTCTC 183046 | ||||| | ||||| |||| ||||| | ||||| || ||| |||||| || Sbjct 745708 GGATTCCTG--AAAGTTCGAATTTTCCTAAAAGGTGGTTATCCTTGGTTAATGCTCTTTC 745651 Query 183047 GCCTTCATATACTTGAATAGTAACTGCTGGCTGATTATCACTATAAGTAGAAAAAACTTG 183106 |||||| | ||||| || || ||||| || || || || |||||||| || Sbjct 745650 ACCTTCAAAAACTTGGATTAACACAGCTGGTTGGTTGTCTTGGTAGGTAGAAAAGGTCTG 745591 Query 183107 CTTTTTATTAATAGGAATAGTTGAATTTCGCGGAACAATTACAGTCATTACTTCTCTGGC 183166 || || | |||||| || ||||| || | | ||||| | ||| | Sbjct 745590 TGACTTCTTCGTTGGAATAACTGTATTTCTTTTAATCAGTTGGGTCATGATACCTCCAAC 745531 Query 183167 AGTTTCTAATCCTAATGATAATGGTGCTACATCTAGTAATAATAAATCTGATGTTTTATC 183226 ||||||| ||||| | || ||| | |||||||| | | | |||| || | || Sbjct 745530 GGTTTCTATACCTAAGGTTAGTGGAGTAACATCTAGCAGAACCACATCT--TGCAAT-TC 745474 Query 183227 TGATTTAATATCACTTAA-AATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCAT 183285 | | || | || |||| | || |||| || ||||| ||||| || ||||||| Sbjct 745473 T-------TCTCCCAAAATAATTCCCGCCTGAATGGCAGCACCGTATGCTACTGCTTCAT 745421 Query 183286 CTGGGTTAATTGAACGAGATAATTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAA 183345 |||||||||| | | | |||||| || || ||||||||| | |||||||||| Sbjct 745420 CTGGGTTAATACCTCTATTTGGTTCTTTACCGTTGAAAAATTCTTTTATAATTTGTTGAA 745361 Query 183346 TTTTTGGAATTCTAGTTGAACCACCGACTAATACTACTTCATCGATATTACT-TTTACTA 183404 |||| || || | ||| || || || |||| || | ||||||||| || || ||| | Sbjct 745360 TTTTGGGGATACGAGTAGATCCTCCTACTAGAACGATTTCATCGATTTTGCTCTTTTCAT 745301 Query 183405 ATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATA 183464 |||| || || | || || || | || || || | ||||| ||||||||| || || Sbjct 745300 ATTT-TGCGTCATCTAGTACCTTCTTTACGGGTTCTAAAGTTTCTCTAAATAAGTC-AT- 745244 Query 183465 CAT--AACTCTTCTAATCTTGCTCTAGTTAAAG-ATGaaaaaaaGTCAATACCATTATA- 183520 ||| || ||||| || | ||||| || || | | | | ||| | || | || || Sbjct 745243 CATTCAATTCTTCAAACTTGGCTCTCGTCAAGGTCTCAGAGAAA--CTATGTCCTTCTAC 745186 Query 183521 TAAGGAATCAATTTCAATCGATGT-TTGTGTAGATGATGATAATGTTCTTTTAGCTCGTT 183579 | | ||||| |||||| ||| ||| | | ||||| |||| || || || Sbjct 745185 GATGTCTTCAATCTCAATCTGTGTAGAGTGCA-CTACAGATAAATTTCTCTTTGCAATTT 745127 Query 183580 C-ACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATCTGTAATATCT-TGTTTATG 183637 | || | || |||||| | | | ||| || | | | | |||| ||||| | Sbjct 745126 CGACTTCCT-TTCTTAACTTTTGGATGGCTCTCTTATCAGATCTTAAATCTATGTTTGTC 745068 Query 183638 TT-TTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTATCAAAATCTTCACCAC 183696 || ||||| ||||| | ||||||| | | | |||| ||| || || || || | Sbjct 745067 TTCTTCTTAAAAATT--TTGATAAAATAATCCATAACTCTTTGATCGAAGTCCTCTCCTC 745010 Query 183697 CTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAAAA 183756 ||||||| |||| || || || || | ||| ||||| | || | || || ||||| Sbjct 745009 CTAAATGGGTATTTCCTGCCGTGGCGTAAACCTCAAACACACCATTGTCGATGACTAAAA 744950 Query 183757 TTGATACATCAAATGTACCACCACCCAAATC 183787 | || ||||| || || || || || ||||| Sbjct 744949 TGGACACATCGAAAGTTCCTCCTCCTAAATC 744919 >seq5 Length=2463301 Score = 176 bits (194), Expect = 1e-38 Identities = 182/236 (77%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTA-GAACAAGATGAAGAGTAGACTCTTTTTGAATATTA 140561 ||| ||||||||| ||||| | || || |||| || | || || || ||||| || || Sbjct 611003 TTTGCATACCACCTCGTAAACGTAAGACCAAG-TGTAACGTGGATTCCTTTTGGATGTTG 610945 Query 140562 TAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGA 140621 || ||||| || |||| ||||| || | |||||| |||||||| || || | ||||||| Sbjct 610944 TAGTCAGACAAGGTTCTTCCATCCTCTAATTGTTTGCCAGCAAAAATGAGTCTTTGCTGA 610885 Query 140622 TCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGAT 140681 ||||| || ||||| ||||| |||||||||||||| || ||||| ||||| | |||||| Sbjct 610884 TCAGGGGGGATTCCCTCTTTGTCCTGAATTTTAGCCTTCACATTTTCAATTGTGTCAGAT 610825 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || | || | |||||||| ||||| ||||| || ||||| ||||| Sbjct 610824 GACTCCACATCCAAAGTGATAGTCTTTCCCGTTAGGGTTTTCACGAAAATTTGCAT 610769 Score = 152 bits (168), Expect = 2e-31 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 140541 GTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCA 140600 || || || ||||| || ||||| ||||| || |||| |||||||| | |||||| ||| Sbjct 611193 GTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTTCCATCTTCCAATTGTTTGCCA 611134 Query 140601 GCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT 140660 ||||| || || | || || ||||| || ||||| ||||| ||||||||||| |||||| Sbjct 611133 GCAAAAATAAGTCTCTGTTGGTCAGGTGGGATTCCCTCTTTGTCCTGAATTTTCGCTTTT 611074 Query 140661 ACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTT 140720 ||||| ||||||| || |||| || || || | || | |||||||| ||||| || Sbjct 611073 ACATTTTCAATCGTGTCGGATGACTCCACGTCCAAAGTGATGGTCTTTCCCGTTAGGGTC 611014 Query 140721 TTTACAAAAATCTGCAT 140737 || || ||||| ||||| Sbjct 611013 TTCACGAAAATTTGCAT 610997 Score = 149 bits (164), Expect = 2e-30 Identities = 174/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| | | | ||| || | || | ||||| || ||||| || || | Sbjct 610775 TTTGCATACCACCTCTGAGACGTAGTACTAAGTGTAATGTAGATTCCTTTTGGATGTTGT 610716 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||||| || |||| |||||||| | |||||| |||||||| || || | || || | Sbjct 610715 AGTCAGACAAGGTTCTTCCATCTTCCAATTGTTTGCCAGCAAAAATGAGTCTCTGTTGGT 610656 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| || ||||| ||||| ||||||||||| || || ||||| ||||||| || |||| Sbjct 610655 CAGGTGGGATTCCCTCTTTGTCCTGAATTTTGGCCTTCACATTTTCAATCGTGTCGGATG 610596 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || | |||||||| ||||| || || || ||||| ||||| Sbjct 610595 ACTCCACGTCCAAAGTGATAGTCTTTCCCGTTAGAGTCTTCACGAAAATTTGCAT 610541 Score = 118 bits (130), Expect = 3e-21 Identities = 145/197 (74%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| ||||| | || || | || | || || || ||||| || || | Sbjct 610547 TTTGCATACCACCTCGTAAACGTAACACCAAGTGTAAGGTGGATTCCTTTTGGATGTTGT 610488 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||||| || |||| ||||| || | ||| || |||||||| || || | || || | Sbjct 610487 AGTCAGACAAGGTTCTTCCATCCTCTAATTGCTTGCCAGCAAAAATAAGTCTCTGTTGGT 610428 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| || ||||| ||||| |||||||||||||| || ||||| ||||| | || |||| Sbjct 610427 CAGGTGGGATTCCCTCTTTGTCCTGAATTTTAGCCTTCACATTTTCAATTGTGTCGGATG 610368 Query 140683 GTTCAACTTC--AAGTG 140697 || || || ||||| Sbjct 610367 ACTCCACGTCCAAAGTG 610351 Score = 104 bits (114), Expect = 7e-17 Identities = 255/383 (67%), Gaps = 4/383 (1%) Strand=Plus/Minus Query 206449 TGGTCAATATATCGAGCTGTTTTATTAAATACGCCTAGCATAGGAATAATACCATTAGAA 206508 ||||| | ||||| |||||| | ||| || || | ||||| || | | || || || Sbjct 674991 TGGTCTACATATCTAGCTGTATCATTGAACACCCTCAGCATTGGCACTAACCCGTTGGAT 674932 Query 206509 GTTCCATTTGTTCCTCTAATAT--GACTGCCAGTCCCTCTAATATTATGTATATGTAATC 206566 |||| || ||||||||||| | || | |||| |||||||| |||| || || Sbjct 674931 ATTCCGTTGGTTCCTCTAATGTAGGAGTTTT-GTCC-TCTAATATCCTGTACCGCTACTC 674874 Query 206567 CAATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTTTAATGTATTATAAATTCCAT 206626 ||||||| || ||| ||| ||| || || | ||| | || | |||| || | Sbjct 674873 CAATTCCACCAGCCGTTTTGCTAATCAGGGCGCACTGTTTCAGCGTCTCGAAAATACCTT 674814 Query 206627 CAACACTATCACTTTCCATAGCAATTAAAAAACAAGAACTTAATTGTGGTCGTGGCGTTC 206686 ||| |||| || |||| | | ||||| || | ||| |||| ||||| | Sbjct 674813 CAATCGAATCAGCTTTCATACAGAGAAGGAAACAGGACGACATTTGCGGTCTGGGCGTCC 674754 Query 206687 CAGCATTAAATAAAGTAGGAGTAGCATGTGTAAAATATTTTTGAGACATTAAATTATAAG 206746 ||| ||| || || ||||| || || ||||||||||||||||||||||| | || ||| | Sbjct 674753 CAGAATTGAACAACGTAGGTGTTGCGTGTGTAAAATATTTTTGAGACATAAGATGATACG 674694 Query 206747 TAGTTTTCACTTTTTCTAAATCATTTTCGTGTAAACAAATTGCTACACGTAACCACATAT 206806 | | | ||||||| | ||| ||| | | ||| | ||| | | | || || Sbjct 674693 TCTCTAGCGCTTTTTCCAGATCCCCAATGTGGATGCCAATGGATACTCTCATCAGCAGAT 674634 Query 206807 ATTGAGGTCTTTCAATTATTTTT 206829 ||| |||||||| || || ||| Sbjct 674633 GTTGTGGTCTTTCGATAATCTTT 674611 >seq14 Length=2283415 Score = 98.7 bits (108), Expect = 3e-15 Identities = 224/336 (67%), Gaps = 6/336 (2%) Strand=Plus/Plus Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 ||||| | |||||||| |||| ||||| ||||| || | |||| | | ||| Sbjct 1528484 GTTTTGGAAAAAATGAAAGAAACAGCTGAGAATTATTTGGGAAGGAAAGTACATCAAGCT 1528543 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 ||||| || ||||| || |||||||||||| | || | || || || || || || Sbjct 1528544 GTTATCACAGTACCTGCTTATTTTAATGATTCACAAAGGCAAGCCACGAAGGACGCAGGA 1528603 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 | ||||| || || |||| || |||| ||||| || || || || || || | ||| Sbjct 1528604 AAAATTGCAGGTTTGGATGTGCTTCGAATTATTAACGAGCCAACCGCAGCGGCTTTAGCA 1528663 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 | |||| | | ||| ||| ||| | || ||| ||| ||||||||| ||| Sbjct 1528664 TTTGGGTTAG---AAAAGAGCGAC---GGGAAGGTCATTGCCGTTTATGATTTAGGAGGT 1528717 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 ||||| ||||| || || | | | || | || |||||||||| ||||| || Sbjct 1528718 GGTACCTTTGACGTTTCCATTTTGGAAATTCTGGGAGGTGTTTTTGAAGTGAAAGCGACA 1528777 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888 ||| |||| | | || |||||||| |||||| Sbjct 1528778 AATGGAAATACGTCTTTAGGAGGAGAAGACTTTGAT 1528813 >seq8 Length=1026601 Score = 96.9 bits (106), Expect = 1e-14 Identities = 60/63 (95%), Gaps = 1/63 (2%) Strand=Plus/Minus Query 423966 TCCGTTAGCTCAGTTGGTTAGAGCGTGCGGCTGTTAACCGCAATGTCACTGGTTCGATCC 424025 ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 675210 TCCGT-AGCTCAGTTGGTTAGAGCGTGCGGCTGTTAACCGCAAGGTCGCTGGTTCGATCC 675152 Query 424026 CAG 424028 ||| Sbjct 675151 CAG 675149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515251332556874