Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F000725905.1_202014-07-21] 158 sequences; 27,817,468 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq5 84.2 2e-11 >seq5 Length=2463301 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/156 (74%), Gaps = 10/156 (6%) Strand=Plus/Minus Query 74462 ATAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCAT 74521 ||||||| |||||||||| || |||||||||||||| || | | || ||| ||||| Sbjct 2270468 ATAATCAGCGACCCGCTTCTCGAAAAAGTTGGTCTTTCCCTGAAGAGATATGAGGTCCAT 2270409 Query 74522 CCAGTCGAAAGGGTTCTTTGCACCGT-AAATAGGCTTCT----CCCCAAACTGTGCCATG 74576 ||||| ||| || ||||||| ||| ||||| ||||| |||||||| | ||| Sbjct 2270408 CCAGTTGAAGGGATTCTTTG---CGTGAAATA-TCTTCTTCGACCCCAAACACT-CCAAC 2270354 Query 74577 AGGCGATCCGCCACAAATTGAATGTACTGCGTCATT 74612 | | || |||||||| | ||| ||||| | |||| Sbjct 2270353 AACCTGTCTGCCACAAACTCAATATACTGTGACATT 2270318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214919248400