Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F001680005.1_202016-07-06] 14 sequences; 27,685,530 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq4 98.7 1e-15 >seq4 Length=1862670 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||||| | | ||| ||||| ||||| || ||||| || || || || || || Sbjct 692967 CCACCTCGTAAACGTAAGACCAAGTGTAACGTGGATTCCTTTTGGATGTTGTAGTCAGAC 692908 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||||| | ||| ||||||||||| ||||||||||| | |||||||||||| || || Sbjct 692907 AAGGTTCTTCCATCCTCTAATTGTTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGGGGG 692848 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||| ||||| || || Sbjct 692847 ATTCCCTCTTTGTCCTG 692831 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| || | || ||| || ||||| |||||||| || || || || || || Sbjct 692739 CCACCTCTGAGACGTAGTACTAAGTGTAATGTAGATTCCTTTTGGATGTTGTAGTCAGAC 692680 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||||| | ||| || |||||||| ||||||||||| | ||| || || || || || Sbjct 692679 AAGGTTCTTCCATCTTCCAATTGTTTGCCAGCAAAAATGAGTCTCTGTTGGTCAGGTGGG 692620 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||| ||||| || || Sbjct 692619 ATTCCCTCTTTGTCCTG 692603 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| || | || ||| || ||||| || ||||| || || ||||| || || Sbjct 693195 CCACCTCTCAGACGTAGTACTAAGTGTAAGGTGGATTCCTTTTGGATGTTATAGTCAGAC 693136 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||||| | ||| || |||||||| ||||||||||| | ||| || || || || || Sbjct 693135 AAGGTTCTTCCATCTTCCAATTGTTTGCCAGCAAAAATAAGTCTCTGTTGGTCAGGTGGG 693076 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||| ||||| || || Sbjct 693075 ATTCCCTCTTTGTCCTG 693059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743526269882880