Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F001680005.1_202016-07-06] 14 sequences; 27,685,530 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq9 111 2e-20 >seq9 Length=2583428 Score = 111 bits (122), Expect = 2e-20 Identities = 172/243 (71%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||||||||| ||||| |||||||| ||||| ||| | ||| |||| | | ||||| | Sbjct 211748 GAGATAACATTCAAGGTATCACCAAACCAGCCATCAGACGTTTGGCCAGAAGAGGTGGTG 211689 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | |||||| |||| || ||| | || ||||| || | | || || || | ||||| Sbjct 211688 TGAAGCGTATCTCCGGTTTGATATACGAAGAAATCAGAGGAGTGTTAAAAGTTTTCCTAG 211629 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 | | ||| || | ||| | || || || || ||||| || | ||||||||||| Sbjct 211628 AAAACGTAATTAAAGATTCCATCATGTACACTGAACACGCAAAGAGAAAGACTGTCACTG 211569 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATT-TATGGTTTTGGAAGT 16696 | ||||| || || || | |||||| | ||||| | || ||| |||||||| || || Sbjct 211568 CTATGGACATTGTGTACTCGTTGAAAAGACAAGGAAG-AACATTATATGGTTTCGGTGGT 211510 Query 16697 TAA 16699 ||| Sbjct 211509 TAA 211507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075187199702