Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F001680005.1_202016-07-06] 14 sequences; 27,685,530 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq5 105 6e-18 >seq5 Length=1520521 Score = 105 bits (116), Expect = 6e-18 Identities = 273/407 (67%), Gaps = 12/407 (3%) Strand=Plus/Minus Query 20177 TCTATATGCGTTTTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTA 20236 ||||| || | ||||||| ||| |||| ||||| |||| || |||| | || || Sbjct 1132293 TCTATGTGGTTGTTGTAGACGTGAGCATTGCCCAAAATGTGTATGAACTGTGCAGG-CTG 1132235 Query 20237 AGACCAGTA-ACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGG 20295 | | | || || |||| ||| | || || | ||||||| |||||||| || || Sbjct 1132234 TAAATTGCACACCTGGGCAATCATGTGTGTGAATATGGAATAGGAAGCAATGTTGAAGGG 1132175 Query 20296 AACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGC 20355 || || | ||||| ||| | ||||| ||||||| ||||| || | || || Sbjct 1132174 GACCCCAAGACCCAAGTCACAAGACCTTTGATACATAATGCAGGATAGTTTCCCATCGAA 1132115 Query 20356 TACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGG 20415 || |||||||||||||| | ||||| || || | |||||| ||| ||| Sbjct 1132114 AACGTAAAATTGACATAAGATATGACAAGGAGGTAATGCCATCTGATCCAAATCCTTTAC 1132055 Query 20416 GTTCCACGCACACATAATGATTCTTCTA-TCGTGCGGATTATTTTTTATTAAATCCACAA 20474 ||||| ||||| | || ||||| ||| | || || | |||||||||||||| | || Sbjct 1132054 ATTCCATGCACAAAGGATAATTCTCCTACTTGT-TGGTTCATTTTTTATTAAATGGATAA 1131996 Query 20475 TGTACGACAATTGGTCAAACCCCTGGCCT--GT-ATAGTCA-GCATCCGCGTCCACGTAC 20530 | |||||||| | || | || || || |||| |||| || ||| Sbjct 1131995 CATTTTTTAATTGGTCTACACCTTTATCTTCGTAATTGTCATGCAT----GTTTGTGTAT 1131940 Query 20531 GCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATC 20577 | || |||||||| |||||||||||||| |||| |||||||| || Sbjct 1131939 TCAGCACCAAAGTGTCTCCACTGGAAACCATAAATGGGTCCCAAGTC 1131893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372722759760