Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F001680005.1_202016-07-06] 14 sequences; 27,685,530 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq5 434 8e-116 seq7 208 6e-48 seq9 118 8e-21 seq14 96.9 3e-14 >seq5 Length=1520521 Score = 434 bits (480), Expect = 8e-116 Identities = 1079/1614 (67%), Gaps = 48/1614 (3%) Strand=Plus/Plus Query 517131 TTTTCTTGTTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGAT 517190 ||||||| |||| || ||| | | || ||| || | | ||| | ||||||| | Sbjct 612226 TTTTCTTC--ATCTTCTGCTTTGTACTTTTCAGCGTCGTTCACCATACGGTCAATTTCTT 612283 Query 517191 CTTCAGAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTT----GTT 517246 || || |||||||| | ||| ||||| ||||||| || | ||||| || Sbjct 612284 CTGGGGACAATCTTCCCTTGTCATTGGTAATGGTAATAT----GGTTCTGTTTTCCCGTG 612339 Query 517247 GATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCA 517306 ||||| ||| | ||||| |||||||| |||||||| ||||| | |||||| || |||||| Sbjct 612340 GATTTTTCAACAGCAGTAACATTAAGGATACCATTAGCATCAATATCAAAGGTAACTTCA 612399 Query 517307 ATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTA 517366 ||||| ||||| |||| | || |||||||| || || | | |||| | |||| Sbjct 612400 ATTTGTGGGACTTTTCTCGGTGCTGGTGGGATACCGTCTAGGTGAAATTTACCCAACAAG 612459 Query 517367 TTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGA 517426 || || || ||||| | || || || ||| | | |||||| ||| | | ||| Sbjct 612460 TTGTTGTCCTTAGTTAGGGCTCTCTCTCCTTCGTACACTTGGATCAACACTCCTGGTTGG 612519 Query 517427 TTATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATC 517485 ||||| | ||| || || || | | || | || || || || || || ||||| || Sbjct 612520 TTATCAGCATAGGTAGTGAAGATT-TGACTCTTCTTTGCTGGGATGGTGGTATTTCTCTC 612578 Query 517486 AATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC 517545 ||| | |||||||||| || ||||| ||||| ||||| || || | | | ||||| Sbjct 612579 AATCAGCTTGGTCATAACTCCTCCTGCGGTTTCCAAACCGAGGGATAAGGAACACACATC 612638 Query 517546 AACTAGGACAATATTTTGAA--GTTTTTCATCAGTTTGACCA-ACAAGAATAGCTGCTTG 517602 | || | | || ||| | | || || || |||| |||| ||| |||||||| Sbjct 612639 TAAGAGCAACAAATCTTGTACCGCATTGGATTGGTC--ACCAGACAA-AATGGCTGCTTG 612695 Query 517603 AATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTT--TTA 517660 | || |||||||| ||||| ||||||||||| || | | | | || || || Sbjct 612696 TACTGCTGCACCATACGCAACGGCTTCATCAGGGTTGATGGATC--TGCAGGCTTCCTTT 612753 Query 517661 CCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACT 517720 || || || || | || ||| | | || ||||| | | || || ||||| Sbjct 612754 CCGTTAAAGAACTCCTTAATGAGTGTTTGAATTTTGGGAATTCTTGTGGAACCACCAACA 612813 Query 517721 AATACAATTTCATGCAC-CTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAAC 517779 | |||| ||| ||||| || | || |||| | | ||| || || || ||||| Sbjct 612814 AGGACAACTTCGTGCACGCTCTTCTTG-TCCATCATGGCATCTTTCAATACCTTCTCAAC 612872 Query 517780 GGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAG 517839 || || | | || | || ||| ||||| || ||| | |||||| | | Sbjct 612873 AGGAATTAGCGTATCACGGAAGTAATCGATACAGAGTTCCTCAAATCTGGCTCTACTCAC 612932 Query 517840 AGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGA 517899 || ||| | || || || |||||||| | || |||| ||| || || | ||| || || Sbjct 612933 CGTCACACTGTAGTCGATACCTTCGAAAAGGGAGTCAATTTCGATGGTGGCTTGTGTAGA 612992 Query 517900 AGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC 517959 || |||| | ||| || || | |||||| || | || ||||| ||||||| | || Sbjct 612993 GGAGGATAAGGTACGCTTGGCTCTCTCACATTGAGTTCGTAATCTTCTTAAGGCTCT-GC 613051 Query 517960 TGATT----GATTCAAATCTGTTT---TATATTTTCTCTTGAAATCTTCAACACACCATG 518012 | ||| ||| ||||| || ||| |||||| || |||||||||||||| | Sbjct 613052 T-ATTCTTAGAT--AAATCCTTTCCTCTATTTTTTCTTTTAAAATCTTCAACACAAAAGT 613108 Query 518013 TTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTA 518072 | || | | || ||||||||||||||||| || | |||| ||| | || || | | Sbjct 613109 TCACCAACCTGTTGTCAAAATCTTCACCTCCTAAGTGCGTATCTCCAGCTGTGGCCTTCA 613168 Query 518073 CTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATAT 518132 ||| ||||| |||||| |||| | | || | |||||| ||||| || || | | Sbjct 613169 CTTCGAAAATTCCATCCTCAATCGTTAGGAGGGATACATCGAAAGTTCCTCCTCCGAGGT 613228 Query 518133 CAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAG 518192 | ||||| || | ||| |||| | | ||||| | |||||||| |||| ||||| Sbjct 613229 CGAAAATGAGGATGTTCTTTTCACCCTTTCCTTTTTTGTGCAGACCATAAGCAATAGCAG 613288 Query 518193 CAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTT 518252 | |||||||| || || |||||||||| ||||| | ||||||||| | ||||| || | Sbjct 613289 CTGCAGTTGGCTCGTTGATAATTCTCATGACATTCAAACCAGCAATAGTACCTGCGTCCT 613348 Query 518253 TAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTA 518312 | |||||||| ||||||||||| |||||||| || || || ||||| || |||| ||| Sbjct 613349 TCGTGGCTTGCCTTTGTGAATCATTAAAATAAGCTGGCACGGTAATGACTGCATTTTTTA 613408 Query 518313 CTTCTTTACCAATATAAGCGCT--TGCCGTTTGTTTCATTTTACTTAAAATCATTGATGA 518370 || || || || |||| ||| ||| |||||| || |||| ||| || || Sbjct 613409 TGGACTTTCC--TAAAAACGCTTCTGCATTTTCTTTCATCTTTTGCAAAACCATGGAAGA 613466 Query 518371 AATTTGTTCTGG--GGAAT-ATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGG 518427 |||| ||| || ||||| ||| ||| || ||||| ||||| |||| || Sbjct 613467 GATTTCTTCAGGGTGGAATAATTTCTT---CTCTCCCTGATAGGATACCTCAATCATGGG 613523 Query 518428 TTTATTACCAACA---TTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACT 518484 || | | ||||| | || |||||||||||| ||||||||| || ||| Sbjct 613524 CTTCTCATCAACACCGGACTTGACAGTAAATGGCCAGTGTTTCATATCGCTCTGCACAGA 613583 Query 518485 TTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATT 518544 ||| | || | || |||||||| | ||||||||||||| ||| || ||| || Sbjct 613584 AGATTCAGTGAACTTCCTTCCAATTAACCTCTTTGCATCAAAAACAGTGTTCTCTGGGTT 613643 Query 518545 AATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAAC 518604 |||| |||| | || || ||||||||||| || || || || || || | ||| Sbjct 613644 CCTTGCCACTTGGTTCTTAGCGGCATCTCCAATTAGCCTCTCCGTGTCAGTGAAGGCAAC 613703 Query 518605 ATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTG 518664 || |||||||| || | || || || ||||| ||||| || || || || | ||| Sbjct 613704 GTAAGATGGAGTGGTTCTGTTTCCCTGGTCATTGGCAATGATATCTACATTTTCGTTTCT 613763 Query 518665 CCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCAATTTT 518718 |||||| || || || | | || || || | |||||||| || || || || Sbjct 613764 CCATACTCCGACGCAGGAATAGGTGGTACCAAGGTCAATACCGATGGCGATGTT 613817 >seq7 Length=1883611 Score = 208 bits (230), Expect = 6e-48 Identities = 1034/1602 (65%), Gaps = 71/1602 (4%) Strand=Plus/Plus Query 517136 TTGTTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCA 517195 || ||||| | || |||||| || || || |||||||| | || ||||| |||| Sbjct 867111 TTCTTATCCTCATCGGCAAATTTTTCTGCATCGTTAATCATTTTTTCGATTTGTTCTTTG 867170 Query 517196 GAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCA 517255 || | |||||| || ||| ||||| ||||| ||| ||| ||| |||||| Sbjct 867171 GACAGTCTTCCTTTATCATTGGTAATTGTAATTCCCTTACTTTTTCCTGTACCTTTATCT 867230 Query 517256 GCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGG 517315 | || || | || |||||||| ||| | || || |||||||||| ||| Sbjct 867231 TCCGCTTCTACGTGGAGGATACCATTTTTATCTACTGTGAAGGTCACTTCAATTTTGGGG 867290 Query 517316 ACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCT 517375 || |||||||| || |||||||| ||| | | ||| |||| | | | ||||| Sbjct 867291 ACACCTCTCTGTGCTGGTGGGATTCCTGAAAGTTCGAATTTTCCTAAAAGGTGGTTATCC 867350 Query 517376 TTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATCT 517432 || || ||| || |||||| || |||| |||||| |||| |||| | || || ||| Sbjct 867351 TTGGTTAATGCTCTTTCACCTTCAAAAACTTGGAT--TAAC-ACAGCTGGTTGGTTGTCT 867407 Query 517433 GAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAAT 517491 || || | ||| |||| || || || ||||| ||| ||||| | ||| | Sbjct 867408 TGGTAGGTAGAAAAGG-TCTGTGACTTCTTCGTTGGAATAACTGTATTTCTTTTAATCAG 867466 Query 517492 ATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAG 517551 | |||||| ||||| || | ||||||| ||| | | || ||||| ||||| | || Sbjct 867467 TTGGGTCATGATACCTCCAACGGTTTCTATACCTAAGGTTAGTGGAGTAACATCTAGCAG 867526 Query 517552 GACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGC 517611 || | || ||| | || ||| || |||| || ||| | || ||||| ||||| Sbjct 867527 AACCACATCTTGCAATTCTTC-TC-------CCAA-AATAATTCCCGCCTGAATGGCAGC 867577 Query 517612 ACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAA 517671 ||| ||||| || |||||||| || |||| | | |||| ||| |||||| |||||||| Sbjct 867578 ACCGTATGCTACTGCTTCATCTGGGTTAATACCTCTATTTGGTTCTTTACCGTTGAAAAA 867637 Query 517672 ATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 517731 | | | || |||| | || || ||||||| |||||||| |||| || ||||| Sbjct 867638 TTCTTTTATAATTTGTTGAATTTTGGGGATACGAGTAGATCCTCCTACTAGAACGATTTC 867697 Query 517732 ATGCACCTGTGATTTATCCAG-TTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGAC 517790 || | | || | | | || ||||| || || || || | |||||||| | | Sbjct 867698 ATCGATTT-TGCTCTTTTCATATTTTGCGTCATCTAGTACCTTCTTTACGGGTTCTAAAG 867756 Query 517791 CCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTAT 517850 ||||||| ||||| | | |||||| || || ||||| || | || || | Sbjct 867757 TTTCTCTAAATAAGTCATCATTCAATTCTTCAAACTTGGCTCTCGTCAAGGTCTCAG-AG 867815 Query 517851 AATCAAT-TCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA-AGATAG 517908 || | || |||||| | | |||| |||||| || |||| | | ||||| Sbjct 867816 AAACTATGTCCTTCTACGATGTCTTCAATCTCAATCTGTGTA-GAGTGCACTACAGATAA 867874 Query 517909 TGCACGTTTAGCACGTTC-ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT-GA 517966 | || ||| ||| || | || || | | | || | | |||| | || || || Sbjct 867875 ATTTCTCTTTGCAATTTCGACTTCCTTTCTTAACTTTTGG-ATGGCTCT--CTTATCAGA 867931 Query 517967 T-TCAAATCTGTTTTATATTTTCT-CTTGAAATCTTCAACACACCATGTTACAAGACGAT 518024 | | |||||| | || | | |||| ||| ||| || | | | || | || || | Sbjct 867932 TCTTAAATCTATGTT-TGTCTTCTTCTTAAAAATTTTGATAAA--ATAATCCATAACTCT 867988 Query 518025 T--ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 518082 | ||| || || || ||||| || | |||||||||| ||| || || | || | Sbjct 867989 TTGATCGAAGTCCTCTCCTCCTAAATGGGTATTTCCTGCCGTGGCGTAAACCTCAAACAC 868048 Query 518083 TCCATCTTCAAGAGAC-AAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAA 518141 |||| || | ||| |||| | ||||| ||||| || || | ||| | | | Sbjct 868049 ACCATTGTCGAT-GACTAAAATGGACACATCGAAAGTTCCTCCTCCTAAATCGTAGACCA 868107 Query 518142 GTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 518201 | || | ||| ||| || || || | ||| || || ||||| || ||||||| Sbjct 868108 --AAATGCTCGTCT----CTTCCTTCTTGTCCAAACCGTAAGCCAAAGCTGCTGCAGTTG 868161 Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261 ||||||| ||||| | | || || | ||| ||||| ||||||| || || || |||| Sbjct 868162 GTTCATTTATAATACGAACAATGTTTAAACCTGCAATGGTTCCTGCGTCCTTTGTTGCTT 868221 Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT-TCTTTA 518320 |||| |||| ||| || || || || || || || | ||| || | | ||| |||| Sbjct 868222 GTCTCTGTGCATCATTGAAGTAGGCTGGTACTGTTACAACTGCGTTTTTAACTGGCTTTC 868281 Query 518321 CCAATATAAGCGCTT--GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 518378 |||| || | || || ||| ||||||||| |||| ||| | ||||||| Sbjct 868282 CCAA---AAAGGATTGAGCTATTTCTTTCATTTTTTCCAAAACCATGGCACTGATTTGTT 868338 Query 518379 CTGGGGAATATTGCTTGGATTCAT---TTTGATATGATACTTCAAAATATGG-TTTATTA 518434 |||| | | | | | | ||| | || || || |||| | || ||| ||| | Sbjct 868339 CTGGCGCAAA--GGTCGTCTTCTTATCCTTTATCTG-TACTCTTATATTTGGCTTTCCTT 868395 Query 518435 CCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTT--TGGTCAT 518492 || || | || || ||||| | | || ||||| || | |||| ||||| | Sbjct 868396 CC-TGGTTTACAATTTCGTATGGCAATAAAGTCCTATCT--TTCACAACTTCCTGGTCGT 868452 Query 518493 TAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAG 518552 ||| | ||| || || |||||||| |||| || | || | || || | | | | Sbjct 868453 CAAACTTTCTTCCTATCAATCGTTTCACATCGAATACTGTCTGTGTGGGGTGTAGGGTGG 868512 Query 518553 CTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGT----AAATGAAACATAT 518608 ||| |||| ||||| ||||| | | | || |||| || ||||| ||||| Sbjct 868513 CTTCCAATTTAGCTGCTTCTCCCA----CTTTCCTTTCTCCGTCCACGAATGACACATAG 868568 Query 518609 GATGGAGTTGTGCGATTACCTTGATCATT-CGCAATAATTTCAACTTTACCATTTTGCCA 518667 ||||| || | || || || ||||| |||| ||||| ||| | ||||||| | Sbjct 868569 GATGGCGTGATACGGTTTCCCAACTCATTGTTCAAT-ATTTCGACTCTGCCATTTTTGAA 868627 Query 518668 TACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAAT 518709 ||||| || ||||| |||| || ||||| ||||| || || Sbjct 868628 AACACCAACGCAACTGTAAGTCGTACCTAAGTCAATTCCGAT 868669 Score = 104 bits (114), Expect = 2e-16 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 322241 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 322300 |||||||| || | ||||||||||||||||||||| || || || || | |||||| Sbjct 868134 AAACCGTAAGCCAAAGCTGCTGCAGTTGGTTCATTTATAATACGAACAATGTTTAAACCT 868193 Query 322301 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 322360 ||||| | | | || ||||||||||||||||| ||||| || || |||||||| Sbjct 868194 GCAATGGTTCCTGCGTCCTTTGTTGCTTGTCTCTGTGCATCATTGAAGTAGGCTGGTACT 868253 Query 322361 GTAATAACTGCTTTATTAATAGGTTTT 322387 || | |||||| || |||| || ||| Sbjct 868254 GTTACAACTGCGTTTTTAACTGGCTTT 868280 >seq9 Length=2583428 Score = 118 bits (130), Expect = 8e-21 Identities = 134/177 (76%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 ||| | || ||||| || || ||||| || |||||||||| | |||| | ||| ||| Sbjct 1756683 CCAAATGCTAAAGCCGCTGCGGTTGGCTCGTTAATAATTCGAAGCACATCCAAACCTGCA 1756624 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 ||| ||||||| || || |||||||| ||||||||||| |||||||| ||||| || || Sbjct 1756623 ATTTTTCCTGCGTCCTTCGTGGCTTGCCTTTGTGAATCATTAAAATAAGCAGGTACTGTG 1756564 Query 518297 ATAACGGCATCAGTTAC-TTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTT 518352 ||||| || | | ||| ||| || |||| |||| || |||| ||||||||| Sbjct 1756563 ATAACAGCTTGATGTACTTTCCTTCCCAA-ATAATTCTCAGCTGTTTCTTTCATTTT 1756508 Score = 96.9 bits (106), Expect = 3e-14 Identities = 248/376 (66%), Gaps = 14/376 (4%) Strand=Plus/Minus Query 517268 TTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGA 517327 |||| ||| | || || || | |||||| |||||||||||||| ||||| ||||| | Sbjct 1757583 TTAATAATCGCGTTTGCGTCTACATCAAAGGTGACTTCAATTTGTGGGACTCCTCTAGGT 1757524 Query 517328 GCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTT 517387 ||||| || || || | |||| |||| ||| | | ||||| || | | || | Sbjct 1757523 GCAGGGGGAATTCCCACTAAATCGAATGATCCTAACATTTTATTGTCGCACGCCATTTCT 1757464 Query 517388 CGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAAT 517447 | ||| || | ||| | || |||| | || ||||| || || | || | |||| Sbjct 1757463 CTTTCTCCTTGGAATACTTTGATACTCACCTGTGTTTGGTTGTCAGCTGCGGTGGAAAAT 1757404 Query 517448 ACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACC 517506 | |||| || || || || || || |||||||| | || | ||||| | | || Sbjct 1757403 A-TCTGCGACTTCTTCGTCGGGATAGTGGTGTTTCTGTTGATCAATTTGGTGAAGACTCC 1757345 Query 517507 ACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAG 517566 |||| ||||||| ||||||||| || ||| | ||||| | ||| | | || || Sbjct 1757344 ACCTAGGGTTTCTATACCAAGAGATAGGGGAATTACATCTAGTAGAAGCAAATCTT---- 1757289 Query 517567 TTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGC 517626 || || || ||| || | || | || ||||| ||||| | ||||| || Sbjct 1757288 TTATTTCTCCTTTT--------AGTACTCCTCCCTGGATAGCTGCACCTAACGCAACTGC 1757237 Query 517627 TTCATCAGGATTAACA 517642 ||||||||| || ||| Sbjct 1757236 TTCATCAGGGTTGACA 1757221 Score = 93.3 bits (102), Expect = 3e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 322236 TTCCTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTA 322295 || |||| || |||| | ||| ||||| ||||| || ||||| ||| ||| ||||| | Sbjct 1756691 TTTCTAACCCAAATGCTAAAGCCGCTGCGGTTGGCTCGTTAATAATTCGAAGCACATCCA 1756632 Query 322296 AACCCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTG 322355 |||| |||||||| | | || || ||||| || |||| ||||||||||| || | Sbjct 1756631 AACCTGCAATTTTTCCTGCGTCCTTCGTGGCTTGCCTTTGTGAATCATTAAAATAAGCAG 1756572 Query 322356 GTACAGTAATAACTGCTTTAT 322376 |||| || ||||| |||| || Sbjct 1756571 GTACTGTGATAACAGCTTGAT 1756551 >seq14 Length=1987456 Score = 96.9 bits (106), Expect = 3e-14 Identities = 134/185 (72%), Gaps = 11/185 (6%) Strand=Plus/Plus Query 870794 AAAATTATTG-TCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTT 870852 |||| | ||| |||||| ||||| ||||||||||| |||||||||||| |||||||||| Sbjct 1795734 AAAAGTGTTGGTCGATTTCTCTTCCCCAAATATTGCCAAAGAAATGCATGTTGGACATTT 1795793 Query 870853 AAGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAA-----ATGTGTGGACAC 870907 ||||||||| || | || || || |||| | || ||| | |||||| || Sbjct 1795794 AAGATCAACCATATTAGGAGACAGCATATGTAAAATTTTCGAATTCCTAAATGTGGAAAC 1795853 Query 870908 GATGTTTATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCT 870967 | ||| ||| |||||| | ||||| ||||| || ||||| || ||| | || | Sbjct 1795854 ---GGTTAGGGTA--AATCATATTGGTGACTGGGGTACACAATTTGGAATGATCATAAAT 1795908 Query 870968 TATAT 870972 ||||| Sbjct 1795909 TATAT 1795913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780821705273884