Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F001680005.1_202016-07-06] 14 sequences; 27,685,530 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq12 95.1 1e-14 >seq12 Length=4930710 Score = 95.1 bits (104), Expect = 1e-14 Identities = 195/290 (67%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 175216 AAAGATGAACTTGAAGAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGT 175275 ||| | ||||||||||| || | |||| | | ||| | | || | || | || Sbjct 3560229 AAACAAGAACTTGAAGAAATAATTGATTATTTAAAGAATTCTGATAAATTTACAAAAATA 3560288 Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 ||||||||| | || || || || | ||| | || ||||| ||||| || | Sbjct 3560289 GGTGCCAAGTTACCGAAGGGGATACTCCTGTCCGGTGAACCGGGTACAGGAAAAACGTTA 3560348 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAAC 175395 | || |||| || ||||| ||| | ||||| || ||||| || || | | | | Sbjct 3560349 ATTGCTAGAGCGATAGCGGGGGAAGCGAATGTTCCTTTCATACAAGCATCAGGCTCCGAA 3560408 Query 175396 TTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCC 175455 |||| ||| ||||| || ||||| ||||||| |||| | | || ||||| || ||| Sbjct 3560409 TTTGAGGAAATGTTCGTAGGTGTTGGTGCCAGAAGGATAAGAGAGCTCTTCCAAGCAGCC 3560468 Query 175456 CGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGG 175505 || || |||||||| |||||||||||||| |||||||| || || Sbjct 3560469 AAAAAACATGCGCCATGTATCGTCTTCATTGATGAAATTGATGCAGTTGG 3560518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569495600320