Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F001680005.1_202016-07-06] 14 sequences; 27,685,530 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq11 109 5e-19 >seq11 Length=2627280 Score = 109 bits (120), Expect = 5e-19 Identities = 151/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATC-GCC-CATCGTGGACGAGTCCTCGA 133512 || || | ||||||||| ||||| || ||||| || ||| || ||| ||||| | Sbjct 280450 AAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGCCACAAACCTGACA--TCCTCCA 280393 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 |||||| || | || || |||| ||||||||| || ||||| |||||||| || | Sbjct 280392 ACTGCTTTCCTGAATATATTAGCCTCTGCTGGTCAGGTGGGATTCCTTCCTTATCCTCAA 280333 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 | ||| ||| | | | || ||| |||| | |||||| || | ||||| |||||| | Sbjct 280332 TTTTTGACTTAACATTCCTAATCGTTTCGGATGCCTCCACATCCAGGGTGATGGTTTTTC 280273 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| | ||||||||||| |||||||| Sbjct 280272 CGGTTAATGTTTTTACGAATATCTGCAT 280245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420715401360