Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F001680005.1_202016-07-06] 14 sequences; 27,685,530 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 7e-12 >seq5 Length=1520521 Score = 86.0 bits (94), Expect = 7e-12 Identities = 182/272 (67%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 146875 TTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGG 146934 || ||| | ||||| || |||| ||||| ||||| | ||| | | || | |||| Sbjct 1132344 TTAAGCGTTGGGAACGGGTAGGGGATCCTGTTTAGCTGCACTTTTAAGCTGTCTATGTGG 1132285 Query 146935 TTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTC 146994 ||| ||||||||| || | |||| |||| | || | | |||| | | | Sbjct 1132284 TTGTTGTAGACGTGAGCATTGCCCAAAATGTGTATGAACTGTGCAGGCTGTAAATTGCAC 1132225 Query 146995 ACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGG 147054 || ||||| | ||||| |||| | || ||| || ||||||||||||||||| || Sbjct 1132224 ACCTGGGCAATCATGTGTGTGAATATGGAATAGGAAGCAATGTTGAAGGGGACCCCAAGA 1132165 Query 147055 CCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAAC 147114 |||| ||| | ||||| || |||| ||| || || | ||| ||| |||||||| Sbjct 1132164 CCCAAGTCACAAGACCTTTGATACATAATGCAGGATAGTTTCCCATCGAAAACGTAAAAT 1132105 Query 147115 TGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 || || | ||| || || || || | ||||| Sbjct 1132104 TGACATAAGATATGACAAGGAGGTAATGCCAT 1132073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487897889600