Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F001680005.1_202016-07-06] 14 sequences; 27,685,530 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq5 392 1e-103 seq7 190 6e-43 seq4 176 1e-38 seq9 98.7 3e-15 seq3 96.9 1e-14 >seq5 Length=1520521 Score = 392 bits (434), Expect = 1e-103 Identities = 978/1478 (66%), Gaps = 13/1478 (1%) Strand=Plus/Minus Query 349198 CGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCG 349257 ||| || || || || | ||||| || ||||| || || | || ||| ||| || Sbjct 613812 CGCCATCGGTATTGACCTTGGTACCACCTATTCCTGCGTCGGAGTATGGAGAAACGAAAA 613753 Query 349258 TGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTAC 349317 |||||| || ||||| ||||| || || |||||||| || ||||| |||||||| || || Sbjct 613752 TGTAGATATCATTGCCAATGACCAGGGAAACAGAACCACTCCATCTTACGTTGCCTTCAC 613693 Query 349318 CGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAA 349377 || || ||| | | ||||| ||| | || || || |||| || || ||| | || Sbjct 613692 TGACACGGAGAGGCTAATTGGAGATGCCGCTAAGAACCAAGTGGCAAGGAACCCAGAGAA 613633 Query 349378 TACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATC 349437 || ||||||||||| ||| | | ||||| || | || |||| ||| || Sbjct 613632 CACTGTTTTTGATGCAAAGAGGTTAATTGGAAGGAAGTTCACTGAATCTTCTGTGCAGAG 613573 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497 ||| | ||||| | || |||||||| | | | ||| || || || ||||| Sbjct 613572 CGATATGAAACACTGGCCATTTACTGTCAAGTCCGGTGTTGATGAGAAGCCCATGATTGA 613513 Query 349498 GGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTT 349557 ||| ||| | || || | ||| ||| || |||||||| || || |||||||| Sbjct 613512 GGTATCCTATCAGGGAGAGAAGAAATTATTCCACCCTGAAGAAATCTCTTCCATGGTTTT 613453 Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617 || ||||| |||| ||| ||||| | |||||| | | ||| |||| || || Sbjct 613452 GCAAAAGATGAAAGAAAATGCAGAAGCGTTTTTAGGAAAGTCCATAAAAAATGCAGTCAT 613393 Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 ||| || ||||| |||||||||||| | || | || || || || || || | || Sbjct 613392 TACCGTGCCAGCTTATTTTAATGATTCACAAAGGCAAGCCACGAAGGACGCAGGTACTAT 613333 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 ||| || || ||||| | ||||| || || || || ||||| || || ||||| ||||| Sbjct 613332 TGCTGGTTTGAATGTCATGAGAATTATCAACGAGCCAACTGCAGCTGCTATTGCTTATGG 613273 Query 349738 GCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797 || | |||| | | ||||| || || || ||||| || | || || || || Sbjct 613272 TCTGCACAAAAAAGGAAAGGGTGAAAAGAACATCCTCATTTTCGACCTCGGAGGAGGAAC 613213 Query 349798 TTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGG 349857 ||| |||||||| || ||||| |||| || |||||||| ||||| || || || ||||| Sbjct 613212 TTTCGATGTATCCCTCCTAACGATTGAGGATGGAATTTTCGAAGTGAAGGCCACAGCTGG 613153 Query 349858 TGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGA 349917 ||||| || | || || ||||||||||| || | | || || |||| |||| Sbjct 613152 AGATACGCACTTAGGAGGTGAAGATTTTGACAACAGGTTGGTGAACTTTTGTGTTGAAGA 613093 Query 349918 ATTTAAGCGTCAAGCTA---AAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCT 349974 ||||| | || || || ||| | | ||| ||||| | | | | Sbjct 613092 TTTTAAAAGAAAAAATAGAGGAAAGGATTTATCTAAGAATAGCAGAGCCTTAAGAAGATT 613033 Query 349975 AAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGA 350034 | ||||| ||||| | || |||||| ||||||| || |||| ||| || | || || Sbjct 613032 ACGAACTCAATGTGAGAGAGCCAAGCGTACCTTATCCTCCTCTACACAAGCCACCATCGA 612973 Query 350035 AATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGA 350094 |||||| || ||| || || | || | | | | | | | || | ||||| Sbjct 612972 AATTGACTCCCTTTTCGAAGGTATCGACTACAGTGTGACGGTGAGTAGAGCCAGATTTGA 612913 Query 350095 AGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGA 350154 ||| | ||||| ||| || | | || | |||||| || || ||||| ||||| Sbjct 612912 GGAACTCTGTATCGATTACTTCCGTGATACGCTAATTCCTGTTGAGAAGGTATTGAAAGA 612853 Query 350155 TGCAAAAATGTCCAAAAATCAGATTG-ATGAAGTAGTTTTAGTTGGTGGTTCTACACGTA 350213 ||| | ||| ||| || || || | ||||| || | ||||||||||| ||| | | Sbjct 612852 TGCCATGATGGACAAGAA-GAGCGTGCACGAAGTTGTCCTTGTTGGTGGTTCCACAAGAA 612794 Query 350214 TTCCAAAAGTTC-AACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCA 350272 |||| ||| ||| |||| | | || ||||| ||||| || || ||| | | ||||| Sbjct 612793 TTCCCAAAATTCAAACACTCATTA-AGGAGTTCTTTAACGGAAAGGAAGCCTGCAGATCC 612735 Query 350273 ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGA 350332 || || || |||||||| ||||| |||||||| || || || ||| | ||||| ||||| Sbjct 612734 ATCAACCCTGATGAAGCCGTTGCGTATGGTGCAGCAGTACAAGCAGCCATTTTGTCTGG- 612676 Query 350333 AATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTT 350389 | | || || | | ||| | || || ||||||| | | | || || Sbjct 612675 --TGACCAATCCAATGCGGTACAAGATTTGTTGCTCTTAGATGTGTGTTCCTTATCCCTC 612618 Query 350390 GGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCT 350449 || || ||||| | || | ||| ||||| || ||| ||||||| || | || Sbjct 612617 GGTTTGGAAACCGCAGGAGGAGTTATGACCAAGCTGATTGAGAGAAATACCACCATCCCA 612558 Query 350450 ACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAA 350509 |||| ||| |||| || |||| | ||| ||||| || |||| || || ||| Sbjct 612557 GCAAAGAAGAGTCAAATCTTCACTACCTATGCTGATAACCAACCAGGAGTGTTGATCCAA 612498 Query 350510 GTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTA 350569 || | ||||| || | || | ||||| || || || | || ||||| |||| Sbjct 612497 GTGTACGAAGGAGAGAGAGCCCTAACTAAGGACAACAACTTGTTGGGTAAATTTCACCTA 612438 Query 350570 AGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGAT 350629 | || |||||| || ||| ||| || || |||||||| | || ||||||||| Sbjct 612437 GACGGTATCCCACCAGCACCGAGAAAAGTCCCACAAATTGAAGTTACCTTTGATATTGAT 612378 Query 350630 TCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATC 350667 | |||||||| | |||||||| || ||||||||||| Sbjct 612377 GCTAATGGTATCCTTAATGTTACTGCTGTTGAAAAATC 612340 Score = 255 bits (282), Expect = 2e-62 Identities = 685/1032 (66%), Gaps = 23/1032 (2%) Strand=Plus/Plus Query 182763 TTTTTAGCCTCAATACTTCCTTTAAATTCCTCATCTTCT--TTAGCATACTTTTCAGCAT 182820 ||| | || ||||| || ||| ||| ||||||||| || | ||||||||||| | Sbjct 612202 TTTCTGGCTTCAATTCTCTTCTTATTTTCTTCATCTTCTGCTTTG--TACTTTTCAGCGT 612259 Query 182821 CCATTGTCATTCTTTCTATTTCATCTTTAGA-AAGATGACCTGCATCATTTGTAAT--TA 182877 | | ||| | || ||||| ||| || || | ||| ||||| ||||| || Sbjct 612260 CGTTCACCATACGGTCAATTTCTTCTGGGGACAATCTTCCCTTG-TCATTGGTAATGGTA 612318 Query 182878 CTACATTACTAGTTACTCCAGTTGATTTTTCAAGTGCGCTAACATTTAAAATACCATTAG 182937 || | || || ||| || |||||||||| || ||||||| | |||||||||| Sbjct 612319 ATATGGTTCTGTTT--TCCCGTGGATTTTTCAACAGCAGTAACATTAAGGATACCATTAG 612376 Query 182938 AGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGTGGCATTGGTGGAATTCCAG 182997 |||| |||||| | |||||||| ||||| || || || |||||| || || | Sbjct 612377 CATCAATATCAAAGGTAACTTCAATTTGTGGGACTTTTCTCGGTGCTGGTGGGATACC-G 612435 Query 182998 TTAAAGT-AAATTCACCTAATTTATTATTATCTTTAGTTCTTGCTCTCTCGCCTTCATAT 183056 | | || ||||| ||| || || || || |||||| |||||||| ||||| || Sbjct 612436 TCTAGGTGAAATTTACCCAACAAGTTGTTGTCCTTAGTTAGGGCTCTCTCTCCTTCGTAC 612495 Query 183057 ACTTGAATAGTAACTGCTGGCTGATTATCACTATAAGTAGAAAAAACTTGCTTTTTATTA 183116 ||||| || ||| |||| || |||||| ||| |||| || | ||| | || || Sbjct 612496 ACTTGGATCAACACTCCTGGTTGGTTATCAGCATAGGTAGTGAAGATTTGACTCTTCTTT 612555 Query 183117 ATAGGAATAGTTGAATTTCGCGGAACAATTACAGTCATTACTTCTCTGGCAGTTTCTAAT 183176 || || || | ||||| | || | ||||| ||| ||| || ||||| || Sbjct 612556 GCTGGGATGGTGGTATTTCTCTCAATCAGCTTGGTCATAACTCCTCCTGCGGTTTCCAAA 612615 Query 183177 CCTAATGATAATGGTGCTACATCTAGTAATAATAAATCTGATGTTTTATCTGATTTAATA 183236 || | ||||| | ||||||| | || |||||| | || |||| | Sbjct 612616 CCGAGGGATAAGGAACACACATCTAAGAGCAACAAATCTTGTACCGCATTGGATTGGTCA 612675 Query 183237 TCACTTAAAATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATT 183296 || ||||| || ||||| || ||||||||||| ||||| |||||||| ||||| || Sbjct 612676 CCAGACAAAATGGCTGCTTGTACTGCTGCACCATACGCAACGGCTTCATCAGGGTTGATG 612735 Query 183297 GAACGAGATAATTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATT 183356 || | | ||| || || ||||| || || || | | ||||||||| |||||| Sbjct 612736 GATCTGCAGGCTTCCTTTCCGTTAAAGAACTCCTTAATGAGTGTTTGAATTTTGGGAATT 612795 Query 183357 CTAGTTGAACCACCGACTAATACTACTTCAT---CGATATTACTTTTACTAATTTGTGAA 183413 || || |||||||| || | || ||||| | || | || ||| | | || | | Sbjct 612796 CTTGTGGAACCACCAACAAGGACAACTTCGTGCACGCTCTT-CTTGTCC--ATCATGGCA 612852 Query 183414 TCTTTTAAAACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCT 183473 ||||| || || || |||||||| | || | | || |||| ||||| | || Sbjct 612853 TCTTTCAATACCTTCTCAACAGGAATTAGCGTATCACGGAAGTAATCGATACAGAGTTCC 612912 Query 183474 TCTAATCTTGCTCTAGTTAAAGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATT 183533 || ||||| |||||| | | | | |||| ||||| | | | ||| |||||| Sbjct 612913 TCAAATCTGGCTCTACTCACCGTCACACTGTAGTCGATACCTTCGAAAAGGGAGTCAATT 612972 Query 183534 TCAATCGATGTTTGTGTAGATGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTT 183593 || || | | ||||||||| || ||||| || | || |||| |||||| |||| | Sbjct 612973 TCGATGGTGGCTTGTGTAGAGGAGGATAAGGTACGCTTGGCTCTCTCACATTGAGTTCGT 613032 Query 183594 AGTCGACGTAATGATCTTGGATTATCTGTAATATC---TTGTTTATGTTTTCTTTTAAAT 183650 | || | ||| | ||| ||| | | | ||| | | ||| |||||||||||| Sbjct 613033 AATCTTCTTAAGGCTCTGCTATTCTTAGATAAATCCTTTCCTCTATTTTTTCTTTTAAAA 613092 Query 183651 TCAGTAATA-AAATGTTGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATC 183709 || || | ||| ||| | || || | |||||||||||||| ||||| || ||||| Sbjct 613093 TCTTCAACACAAAAGTT-CACCAACCTGTTGTCAAAATCTTCACCTCCTAAGTGCGTATC 613151 Query 183710 GCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAAAATTGATACATCAAA 183769 ||||| || || || ||||| || ||||| || ||||| ||| | |||||||| || Sbjct 613152 TCCAGCTGTGGCCTTCACTTCGAAAATTCCATCCTCAATCGTTAGGAGGGATACATCGAA 613211 Query 183770 TGTACCACCACC 183781 || || || || Sbjct 613212 AGTTCCTCCTCC 613223 >seq7 Length=1883611 Score = 190 bits (210), Expect = 6e-43 Identities = 801/1248 (64%), Gaps = 35/1248 (3%) Strand=Plus/Minus Query 349550 ATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGAT 349609 |||||||| | |||||||| ||||| ||| || | | ||| || | |||| | | Sbjct 868324 ATGGTTTTGGAAAAAATGAAAGAAATAGCTCAATCCTTTTTGGGAAAGCCAGTTAAAAAC 868265 Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 || ||| | || ||||||||||| || |||||||| ||| | |||||||| || || Sbjct 868264 GCAGTTGTAACAGTACCAGCCTACTTCAATGATGCACAGAGACAAGCAACAAAGGACGCA 868205 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || | |||||| || ||||| || | | || || |||||||| ||||| ||||| | Sbjct 868204 GGAACCATTGCAGGTTTAAACATTGTTCGTATTATAAATGAACCAACTGCAGCAGCTTTG 868145 Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || || | || || | | |||| | | ||| | | | |||||||| Sbjct 868144 GCTTACGGTTTGGACAAGAAGG------AAGAGACGAGCATTTTGGTCTACGATTTAGGA 868091 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 || || ||||| ||||| || | || | || | || | ||||| ||| | || Sbjct 868090 GGAGGAACTTTCGATGTGTCCATTTTAGTCATCGACAATGGTGTGTTTGAGGTTTACGCC 868031 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCG---TCTCGTTTCGCAT 349906 || || || |||| ||| | || ||||| || || ||| | | | | | || || Sbjct 868030 ACGGCAGGAAATACCCATTTAGGAGGAGAGGACTTCGATCAAAGAGTTATGGATT---AT 867974 Query 349907 TTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATG 349966 ||| | ||| |||||| | | || || ||| | || | || ||||| || Sbjct 867973 TTTATCAAAATTTTTAAGAAGAAGACAAACATAGATTTAAGATCTGATAAGAGAGCCATC 867914 Query 349967 CGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACC 350026 | |||||| | ||| ||| ||| | ||||| | || | | | | Sbjct 867913 CAAAAGTTAAGAAAGGAAGTCGAAATTGCAAAGAGAAATTTATC-TGTAGTGCACTCTAC 867855 Query 350027 TCT-ATTGAAATTGATTCTCTTGCTGATGG-CAAAGATTTCTTTTCATCTATTACACGTG 350084 | ||||| ||||| | | || || || || ||||| | | | || | | Sbjct 867854 ACAGATTGAGATTGAAGACATCGTAGAAGGACATAG-TTTCTCTGAGACCTTGACGAGAG 867796 Query 350085 CTCGGTTTGAAGAATTATGTATG--GATCTTTTTAGAGCAACAATGGATCCTGTGGAAAA 350142 | |||||||||||| | ||| || | ||||||| ||| | || || || | || Sbjct 867795 CCAAGTTTGAAGAATT--GAATGATGACTTATTTAGAGAAACTTTAGAACCCGTAAAGAA 867738 Query 350143 AGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATT-GATGAAGTAGTTTTAGTTGGTG 350201 ||| || | || |||||| | | ||| | || | | |||||| | ||| |||| || | Sbjct 867737 GGTACTAGATGACGCAAAA-TATGAAAAGAGCAAAATCGATGAAATCGTTCTAGTAGGAG 867679 Query 350202 GTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC 350261 | ||||| ||||| || ||| ||||||| | || || ||||| || || ||||||| Sbjct 867678 GATCTACTCGTATCCCCAAAATTCAACAAATTATAAAAGAATTTTTCAACGGTAAAGAAC 867619 Query 350262 CTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTA 350321 | |||| ||||| ||||||||||| || ||||| |||||||| ||||||| | Sbjct 867618 CAAATAGAGGTATTAACCCAGATGAAGCAGTAGCATACGGTGCTGCCATTCAGGCGGGAA 867559 Query 350322 TTTTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCAC 350381 |||| | | | |||| || || ||| | | || |||||||| ||||||| Sbjct 867558 --TTATTTTGGGAGAAGAATTGCAA-------GATGTGGTTCTGCTAGATGTTACTCCAC 867508 Query 350382 TTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTA 350441 | | | || ||||||| ||| | | ||||| || ||| ||||||| Sbjct 867507 TAACCTTAGGTATAGAAACCGTTGGAGGTATCATGACCCAACTGATTAAAAGAAATACAG 867448 Query 350442 CTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAA 350501 | | || || || ||||| || || |||||||| | ||| || || ||||| || Sbjct 867447 TTATTCCAACGAAGAAGTCACAGACCTTTTCTACCTACCAAGACAACCAACCAGCTGTGT 867388 Query 350502 CAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAAT 350561 ||| ||||| |||||||||||| | || || || ||||| | | ||| ||| Sbjct 867387 TAATCCAAGTTTTTGAAGGTGAAAGAGCATTAACCAAGGATAACCACCTTTTAGGAAAAT 867328 Query 350562 TTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCG 350621 | || | ||| |||||| | ||||| || || | |||||||| | ||| Sbjct 867327 TCGAACTTTCAGGAATCCCACCAGCACAGAGAGGTGTCCCCAAAATTGAAGTGACCTTCA 867268 Query 350622 ATATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAAAGT- 350680 | ||| ||||||||| | | || || | || ||| | || |||||| Sbjct 867267 CAGTAGATAAAAATGGTATCCTCCACGTAGAAGCGGAAGATAAAGGTACAGGAAAAAGTA 867208 Query 350681 AGTAAGGTAGAAATTACTAATGATAAATCTAGACTTTCAAAAGAAGATATTGAGAAAATG 350740 || | || |||||| ||||||||| ||||| || |||||| | || || |||||| Sbjct 867207 AGGGAATTA-CAATTACCAATGATAAAGGAAGACTGTCCAAAGAACAAATCGAAAAAATG 867149 Query 350741 ACACAAGATGCCGAATCATATGCTAAGGAAGATGAAGAATTTA-GAGA 350787 | | ||||| ||| || ||| | || ||| |||||| || |||| Sbjct 867148 ATTAACGATGCAGAAAAATTTGCCGATGAGGAT-AAGAATCTACGAGA 867102 Score = 131 bits (144), Expect = 5e-25 Identities = 679/1051 (65%), Gaps = 43/1051 (4%) Strand=Plus/Plus Query 182754 TCAAGATTATTTTTAGCCTCAATACTTCCTT-TAAATTCCTCATCTTCTTTAGCATACTT 182812 ||||| || ||||| || || | || || || |||| | ||| || | ||| | || Sbjct 867075 TCAAGGTTGTTTTTCGCTTCTACTTTTTCTCGTAGATTCTT-ATCCTCATCGGCAAATTT 867133 Query 182813 TTCAGCATCCATTGTCATTCTTTCTATTTCATCTTTAGAAAGATGACCTGCATCATTTGT 182872 ||| ||||| | ||||| |||| |||| ||||| || || ||| |||||| || Sbjct 867134 TTCTGCATCGTTAATCATTTTTTCGATTTGTTCTTTGGACAGTCTTCCTTTATCATTGGT 867193 Query 182873 AATTACTACATTAC--TAGTTACTCCAGTTGATTTTTCAAGTGCGCTA--ACATTTAAAA 182928 |||| || ||| | || || ||| || ||| || | |||| || | | | Sbjct 867194 AATTG-TA-ATTCCCTTACTTTTTCCTGTACCTTTATCT--TCCGCTTCTACGTGGAGGA 867249 Query 182929 TACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGTGGCATTGGTG 182988 ||||||| || || || | |||||||| | || ||||||| | ||||| Sbjct 867250 TACCATTTTTATCTACTGTGAAGGTCACTTCAATTTTGGGGACACCTCTCTGTGCTGGTG 867309 Query 182989 GAATTCCAGTTAAAGTA--AATTCACCTAATTTATTATTATCTTTAGTTCTTGCTCTCTC 183046 | ||||| | ||||| |||| ||||| | ||||| || ||| |||||| || Sbjct 867310 GGATTCCTG--AAAGTTCGAATTTTCCTAAAAGGTGGTTATCCTTGGTTAATGCTCTTTC 867367 Query 183047 GCCTTCATATACTTGAATAGTAACTGCTGGCTGATTATCACTATAAGTAGAAAAAACTTG 183106 |||||| | ||||| || || ||||| || || || || |||||||| || Sbjct 867368 ACCTTCAAAAACTTGGATTAACACAGCTGGTTGGTTGTCTTGGTAGGTAGAAAAGGTCTG 867427 Query 183107 CTTTTTATTAATAGGAATAGTTGAATTTCGCGGAACAATTACAGTCATTACTTCTCTGGC 183166 || || | |||||| || ||||| || | | ||||| | ||| | Sbjct 867428 TGACTTCTTCGTTGGAATAACTGTATTTCTTTTAATCAGTTGGGTCATGATACCTCCAAC 867487 Query 183167 AGTTTCTAATCCTAATGATAATGGTGCTACATCTAGTAATAATAAATCTGATGTTTTATC 183226 ||||||| ||||| | || ||| | |||||||| | | | |||| || | || Sbjct 867488 GGTTTCTATACCTAAGGTTAGTGGAGTAACATCTAGCAGAACCACATCT--TGCAAT-TC 867544 Query 183227 TGATTTAATATCACTTAA-AATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCAT 183285 | | || | || |||| | || |||| || ||||| ||||| || ||||||| Sbjct 867545 T-------TCTCCCAAAATAATTCCCGCCTGAATGGCAGCACCGTATGCTACTGCTTCAT 867597 Query 183286 CTGGGTTAATTGAACGAGATAATTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAA 183345 |||||||||| | | | |||||| || || ||||||||| | |||||||||| Sbjct 867598 CTGGGTTAATACCTCTATTTGGTTCTTTACCGTTGAAAAATTCTTTTATAATTTGTTGAA 867657 Query 183346 TTTTTGGAATTCTAGTTGAACCACCGACTAATACTACTTCATCGATATTACT-TTTACTA 183404 |||| || || | ||| || || || |||| || | ||||||||| || || ||| | Sbjct 867658 TTTTGGGGATACGAGTAGATCCTCCTACTAGAACGATTTCATCGATTTTGCTCTTTTCAT 867717 Query 183405 ATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATA 183464 |||| || || | || || || | || || || | ||||| ||||||||| || || Sbjct 867718 ATTT-TGCGTCATCTAGTACCTTCTTTACGGGTTCTAAAGTTTCTCTAAATAAGTC-AT- 867774 Query 183465 CAT--AACTCTTCTAATCTTGCTCTAGTTAAAG-ATGaaaaaaaGTCAATACCATTATA- 183520 ||| || ||||| || | ||||| || || | | | | ||| | || | || || Sbjct 867775 CATTCAATTCTTCAAACTTGGCTCTCGTCAAGGTCTCAGAGAAA--CTATGTCCTTCTAC 867832 Query 183521 TAAGGAATCAATTTCAATCGATGT-TTGTGTAGATGATGATAATGTTCTTTTAGCTCGTT 183579 | | ||||| |||||| ||| ||| | | ||||| |||| || || || Sbjct 867833 GATGTCTTCAATCTCAATCTGTGTAGAGTGCA-CTACAGATAAATTTCTCTTTGCAATTT 867891 Query 183580 C-ACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATCTGTAATATCT-TGTTTATG 183637 | || | || |||||| | | | ||| || | | | | |||| ||||| | Sbjct 867892 CGACTTCCT-TTCTTAACTTTTGGATGGCTCTCTTATCAGATCTTAAATCTATGTTTGTC 867950 Query 183638 TT-TTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTATCAAAATCTTCACCAC 183696 || ||||| ||||| | ||||||| | | | |||| ||| || || || || | Sbjct 867951 TTCTTCTTAAAAATT--TTGATAAAATAATCCATAACTCTTTGATCGAAGTCCTCTCCTC 868008 Query 183697 CTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAAAA 183756 ||||||| |||| || || || || | ||| ||||| | || | || || ||||| Sbjct 868009 CTAAATGGGTATTTCCTGCCGTGGCGTAAACCTCAAACACACCATTGTCGATGACTAAAA 868068 Query 183757 TTGATACATCAAATGTACCACCACCCAAATC 183787 | || ||||| || || || || || ||||| Sbjct 868069 TGGACACATCGAAAGTTCCTCCTCCTAAATC 868099 >seq4 Length=1862670 Score = 176 bits (194), Expect = 1e-38 Identities = 182/236 (77%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTA-GAACAAGATGAAGAGTAGACTCTTTTTGAATATTA 140561 ||| ||||||||| ||||| | || || |||| || | || || || ||||| || || Sbjct 692975 TTTGCATACCACCTCGTAAACGTAAGACCAAG-TGTAACGTGGATTCCTTTTGGATGTTG 692917 Query 140562 TAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGA 140621 || ||||| || |||| ||||| || | |||||| |||||||| || || | ||||||| Sbjct 692916 TAGTCAGACAAGGTTCTTCCATCCTCTAATTGTTTGCCAGCAAAAATGAGTCTTTGCTGA 692857 Query 140622 TCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGAT 140681 ||||| || ||||| ||||| |||||||||||||| || ||||| ||||| | |||||| Sbjct 692856 TCAGGGGGGATTCCCTCTTTGTCCTGAATTTTAGCCTTCACATTTTCAATTGTGTCAGAT 692797 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || | || | |||||||| ||||| ||||| || ||||| ||||| Sbjct 692796 GACTCCACATCCAAAGTGATAGTCTTTCCCGTTAGGGTTTTCACGAAAATTTGCAT 692741 Score = 152 bits (168), Expect = 2e-31 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 140541 GTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCA 140600 || || || ||||| || ||||| ||||| || |||| |||||||| | |||||| ||| Sbjct 693165 GTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTTCCATCTTCCAATTGTTTGCCA 693106 Query 140601 GCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT 140660 ||||| || || | || || ||||| || ||||| ||||| ||||||||||| |||||| Sbjct 693105 GCAAAAATAAGTCTCTGTTGGTCAGGTGGGATTCCCTCTTTGTCCTGAATTTTCGCTTTT 693046 Query 140661 ACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTT 140720 ||||| ||||||| || |||| || || || | || | |||||||| ||||| || Sbjct 693045 ACATTTTCAATCGTGTCGGATGACTCCACGTCCAAAGTGATGGTCTTTCCCGTTAGGGTC 692986 Query 140721 TTTACAAAAATCTGCAT 140737 || || ||||| ||||| Sbjct 692985 TTCACGAAAATTTGCAT 692969 Score = 149 bits (164), Expect = 2e-30 Identities = 174/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| | | | ||| || | || | ||||| || ||||| || || | Sbjct 692747 TTTGCATACCACCTCTGAGACGTAGTACTAAGTGTAATGTAGATTCCTTTTGGATGTTGT 692688 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||||| || |||| |||||||| | |||||| |||||||| || || | || || | Sbjct 692687 AGTCAGACAAGGTTCTTCCATCTTCCAATTGTTTGCCAGCAAAAATGAGTCTCTGTTGGT 692628 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| || ||||| ||||| ||||||||||| || || ||||| ||||||| || |||| Sbjct 692627 CAGGTGGGATTCCCTCTTTGTCCTGAATTTTGGCCTTCACATTTTCAATCGTGTCGGATG 692568 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || | |||||||| ||||| || || || ||||| ||||| Sbjct 692567 ACTCCACGTCCAAAGTGATAGTCTTTCCCGTTAGAGTCTTCACGAAAATTTGCAT 692513 Score = 118 bits (130), Expect = 3e-21 Identities = 145/197 (74%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| ||||| | || || | || | || || || ||||| || || | Sbjct 692519 TTTGCATACCACCTCGTAAACGTAACACCAAGTGTAAGGTGGATTCCTTTTGGATGTTGT 692460 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||||| || |||| ||||| || | ||| || |||||||| || || | || || | Sbjct 692459 AGTCAGACAAGGTTCTTCCATCCTCTAATTGCTTGCCAGCAAAAATAAGTCTCTGTTGGT 692400 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| || ||||| ||||| |||||||||||||| || ||||| ||||| | || |||| Sbjct 692399 CAGGTGGGATTCCCTCTTTGTCCTGAATTTTAGCCTTCACATTTTCAATTGTGTCGGATG 692340 Query 140683 GTTCAACTTC--AAGTG 140697 || || || ||||| Sbjct 692339 ACTCCACGTCCAAAGTG 692323 Score = 104 bits (114), Expect = 7e-17 Identities = 255/383 (67%), Gaps = 4/383 (1%) Strand=Plus/Minus Query 206449 TGGTCAATATATCGAGCTGTTTTATTAAATACGCCTAGCATAGGAATAATACCATTAGAA 206508 ||||| | ||||| |||||| | ||| || || | ||||| || | | || || || Sbjct 756983 TGGTCTACATATCTAGCTGTATCATTGAACACCCTCAGCATTGGCACTAACCCGTTGGAT 756924 Query 206509 GTTCCATTTGTTCCTCTAATAT--GACTGCCAGTCCCTCTAATATTATGTATATGTAATC 206566 |||| || ||||||||||| | || | |||| |||||||| |||| || || Sbjct 756923 ATTCCGTTGGTTCCTCTAATGTAGGAGTTTT-GTCC-TCTAATATCCTGTACCGCTACTC 756866 Query 206567 CAATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTTTAATGTATTATAAATTCCAT 206626 ||||||| || ||| ||| ||| || || | ||| | || | |||| || | Sbjct 756865 CAATTCCACCAGCCGTTTTGCTAATCAGGGCGCACTGTTTCAGCGTCTCGAAAATACCTT 756806 Query 206627 CAACACTATCACTTTCCATAGCAATTAAAAAACAAGAACTTAATTGTGGTCGTGGCGTTC 206686 ||| |||| || |||| | | ||||| || | ||| |||| ||||| | Sbjct 756805 CAATCGAATCAGCTTTCATACAGAGAAGGAAACAGGACGACATTTGCGGTCTGGGCGTCC 756746 Query 206687 CAGCATTAAATAAAGTAGGAGTAGCATGTGTAAAATATTTTTGAGACATTAAATTATAAG 206746 ||| ||| || || ||||| || || ||||||||||||||||||||||| | || ||| | Sbjct 756745 CAGAATTGAACAACGTAGGTGTTGCGTGTGTAAAATATTTTTGAGACATAAGATGATACG 756686 Query 206747 TAGTTTTCACTTTTTCTAAATCATTTTCGTGTAAACAAATTGCTACACGTAACCACATAT 206806 | | | ||||||| | ||| ||| | | ||| | ||| | | | || || Sbjct 756685 TCTCTAGCGCTTTTTCCAGATCCCCAATGTGGATGCCAATGGATACTCTCATCAGCAGAT 756626 Query 206807 ATTGAGGTCTTTCAATTATTTTT 206829 ||| |||||||| || || ||| Sbjct 756625 GTTGTGGTCTTTCGATAATCTTT 756603 >seq9 Length=2583428 Score = 98.7 bits (108), Expect = 3e-15 Identities = 224/336 (67%), Gaps = 6/336 (2%) Strand=Plus/Plus Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 ||||| | |||||||| |||| ||||| ||||| || | |||| | | ||| Sbjct 1756499 GTTTTGGAAAAAATGAAAGAAACAGCTGAGAATTATTTGGGAAGGAAAGTACATCAAGCT 1756558 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 ||||| || ||||| || |||||||||||| | || | || || || || || || Sbjct 1756559 GTTATCACAGTACCTGCTTATTTTAATGATTCACAAAGGCAAGCCACGAAGGACGCAGGA 1756618 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 | ||||| || || |||| || |||| ||||| || || || || || || | ||| Sbjct 1756619 AAAATTGCAGGTTTGGATGTGCTTCGAATTATTAACGAGCCAACCGCAGCGGCTTTAGCA 1756678 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 | |||| | | ||| ||| ||| | || ||| ||| ||||||||| ||| Sbjct 1756679 TTTGGGTTAG---AAAAGAGCGAC---GGGAAGGTCATTGCCGTTTATGATTTAGGAGGT 1756732 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 ||||| ||||| || || | | | || | || |||||||||| ||||| || Sbjct 1756733 GGTACCTTTGACGTTTCCATTTTGGAAATTCTGGGAGGTGTTTTTGAAGTGAAAGCGACA 1756792 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888 ||| |||| | | || |||||||| |||||| Sbjct 1756793 AATGGAAATACGTCTTTAGGAGGAGAAGACTTTGAT 1756828 >seq3 Length=1147333 Score = 96.9 bits (106), Expect = 1e-14 Identities = 60/63 (95%), Gaps = 1/63 (2%) Strand=Plus/Minus Query 423966 TCCGTTAGCTCAGTTGGTTAGAGCGTGCGGCTGTTAACCGCAATGTCACTGGTTCGATCC 424025 ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 1122631 TCCGT-AGCTCAGTTGGTTAGAGCGTGCGGCTGTTAACCGCAAGGTCGCTGGTTCGATCC 1122573 Query 424026 CAG 424028 ||| Sbjct 1122572 CAG 1122570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254128201242