Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F001680005.1_202016-07-06] 14 sequences; 27,685,530 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq13 113 5e-20 >seq13 Length=1997354 Score = 113 bits (124), Expect = 5e-20 Identities = 179/255 (70%), Gaps = 4/255 (2%) Strand=Plus/Minus Query 23777 TTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCT 23836 |||| || | || |||| || |||||| | || || || |||||||||| |||||||| Sbjct 1647946 TTATGTAGTTGTCTATTAACAAGCTATACGTCTCTGAGTGGATATTTTCAACAGCAATCT 1647887 Query 23837 GAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTA 23896 | || ||||| | || || | | ||| || | |||||| | | |||| Sbjct 1647886 GGAAGGAGTAAAATTTCTTTGCCTCCGTAATTTGCACTTGGCGTAAAAATTTGCTTGCTA 1647827 Query 23897 AATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAAT 23956 ||||||| ||||| |||||||| || || |||||||| | |||| |||||| |||| Sbjct 1647826 AATTTTCCAACACAATTCCATCACTCGCTGCGAAGAAAGCCAACACATGTTTTATGAAAT 1647767 Query 23957 GTCTTTCATCAGTTGA--TAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTC 24014 || |||||| || | |||||||| |||| || | ||| | || || |||| ||| Sbjct 1647766 GTTTTTCAT--TTTCATTTAATTTTTCGAAATCTTTCAAATCGCTAGACAAGTCAATTTC 1647709 Query 24015 ATCAACTGTCCAAAA 24029 ||| ||||||| || Sbjct 1647708 TTCAGCTGTCCAGAA 1647694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487908739600