Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F001680005.1_202016-07-06] 14 sequences; 27,685,530 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 2e-11 >seq4 Length=1862670 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 44126 AACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTC 44184 || |||| ||| | |||| ||||||||||||||||| || | | || | | | || Sbjct 692952 AAGACCAAGTGTAACGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTC-CATC 692894 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 || | || || || ||||| || | | |||||||| | || | || || || || Sbjct 692893 CTCTAATTGTTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGGGGGATTCCCTCTTTGTC 692834 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 | || || ||||| || | || ||||| | || ||||| |||| || || || Sbjct 692833 CTGAATTTTAGCCTTCACATTTTCAATTGTGTCAGATGACTCCACATCCAAAGTGATAGT 692774 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||| ||||| |||||||| |||||||| Sbjct 692773 CTTTCCCGTTAGGGTTTTCACGAAAATTTGCAT 692741 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||||||||||||||||| || | | || | | | || |||| || || || ||||| Sbjct 692703 TCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTC-CATCTTCCAATTGTTTGCCAGCAAA 692645 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 || | | ||| || || | || | || || || ||| || || ||||| | Sbjct 692644 AATGAGTCTCTGTTGGTCAGGTGGGATTCCCTCTTTGTCCTGAATTTTGGCCTTCACATT 692585 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | || ||||||| || ||||| |||| || || ||||||||||| || |||||||| Sbjct 692584 TTCAATCGTGTCGGATGACTCCACGTCCAAAGTGATAGTCTTTCCCGTTAGAGTCTTCAC 692525 Query 44326 GAAGATTTGCAT 44337 ||| |||||||| Sbjct 692524 GAAAATTTGCAT 692513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990338576638