Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20fragile_20[genbank_20GCA_5F000956335.1_202015-03-20] 248 sequences; 25,914,542 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq23 98.7 8e-16 >seq23 Length=358523 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 20967 ACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCC 21026 |||| ||||| ||||||||||| || ||||| ||||| |||| | | |||||| Sbjct 176624 ACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGCCACAAACCTGACATCCTCC 176683 Query 21027 AGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCG 21086 | ||||| || | ||| || || ||||||||||| || || || ||||| | | Sbjct 176684 AATTGTTTTCCTGAATATATTAGCCTCTGCTGGTCAGGTGGGACTCCGTCCTTATGTTCA 176743 Query 21087 ATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTG 21146 || ||| ||| || | | | || || |||||| |||| ||| ||||| | Sbjct 176744 ATTTTTGATTTAACATTCCTAATGGTTTCGGATGGCTCCACATCCAGGGTGATGGTTCTT 176803 Query 21147 CCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 ||| |||| ||||| || |||||||||||||||| Sbjct 176804 CCGCTTAATGTTTTTACGAATATTTGCATTTTGA 176837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422257923721568