Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20fragile_20[genbank_20GCA_5F000956335.1_202015-03-20] 248 sequences; 25,914,542 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq23 82.4 6e-11 >seq23 Length=358523 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 ||||||||||| || || ||||| | | |||| |||||| ||| | || |||| | Sbjct 176835 AAAATGCAAATATTCGTAAAAACATTAAGCGGAAGAACCATCACCCTGGATGTGGAGCCA 176776 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 ||| || || | | || ||| |||||||| |||| || || ||||| ||| Sbjct 176775 TCCGAAACCATTAGGAATGTTAAATCAAAAATTGAACATAAGGACGGAGTCCCACCTGAC 176716 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||| || || || ||| | || |||||||| || |||| || |||| || || Sbjct 176715 CAGCAGAGGCTAATATATTCAGGAAAACAATTGGAGGATGTCAGGTTTGTGGCTGACTAC 176656 Query 115463 AACATTCAAAAAGAGTCTAC 115482 ||||| || || ||||| || Sbjct 176655 AACATCCAGAAGGAGTCCAC 176636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425342714397760