Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20fragile_20[genbank_20GCA_5F000956335.1_202015-03-20] 248 sequences; 25,914,542 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq23 98.7 8e-16 >seq23 Length=358523 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 16726 TACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTC 16785 ||||| |||| ||||||||||| || ||||||||||| |||| || | ||||| Sbjct 176623 TACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGCCACAAACCTGACATCCTC 176682 Query 16786 CAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGC 16845 ||||||||| || | ||| || |||| ||| ||||| || || || || || | | Sbjct 176683 CAATTGTTTTCCTGAATATATTAGCCTCTGCTGGTCAGGTGGGACTCCGTCCTTATGTTC 176742 Query 16846 AATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTT 16905 ||||| || || | | | || ||| |||||| |||| |||||||||| | Sbjct 176743 AATTTTTGATTTAACATTCCTAATGGTTTCGGATGGCTCCACATCCAGGGTGATGGTTCT 176802 Query 16906 TCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 |||| | | ||||| || || || ||||||||| Sbjct 176803 TCCGCTTAATGTTTTTACGAATATTTGCATTTTG 176836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405086775621520