Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20fragile_20[genbank_20GCA_5F000956335.1_202015-03-20] 248 sequences; 25,914,542 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq45 87.8 2e-12 >seq45 Length=210479 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/133 (76%), Gaps = 6/133 (5%) Strand=Plus/Plus Query 25026 GGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG---AAGCAA 25082 || ||| ||||||| | || |||||||| || ||||| || || | || |||| | Sbjct 197926 GGAAAAACCATCACCTTGGACGTGGAGTCATCGGACACAATTGAA--AATGTAAAAGCGA 197983 Query 25083 AAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAA 25142 ||| ||| |||||||| || ||||||||||| || ||| | |||| ||||| || ||| Sbjct 197984 AAATTCAG-GACAAAGAGGGAATTCCACCTGATCAGCAGAGACTTATATTTGCTGGAAAA 198042 Query 25143 CAATTAGAAGATG 25155 ||||| ||||||| Sbjct 198043 CAATTGGAAGATG 198055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326690266120