Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20fragile_20[genbank_20GCA_5F000956335.1_202015-03-20] 248 sequences; 25,914,542 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq23 82.4 7e-11 >seq23 Length=358523 Score = 82.4 bits (90), Expect = 7e-11 Identities = 114/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| |||||||||||||||| ||||| | | |||||||| || || | || || || Sbjct 176677 ATCCTCCAATTGTTTTCCTGAATATATTAGCCTCTGCTGGTCAGGTGGGACTCCGTCCTT 176736 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCT-ACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303 || || || |||||| || | | | || | ||| ||||| | ||| || || || || | Sbjct 176737 ATGTTCAA-TTTTTGATTTAACATTCCTAATGGTTTCGGATGGCTCCACATCCAGGGTGA 176795 Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| | ||| ||| |||||||| || |||||||| Sbjct 176796 TGGTTCTTCCGCTTAATGTTTTTACGAATATTTGCAT 176832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452001798790080