Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20fragile_20[genbank_20GCA_5F000956335.1_202015-03-20] 248 sequences; 25,914,542 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq11 84.2 3e-11 >seq11 Length=477202 Score = 84.2 bits (92), Expect = 3e-11 Identities = 118/164 (72%), Gaps = 4/164 (2%) Strand=Plus/Plus Query 166049 TTTGTTGGTACAAATAATATAGCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTA 166108 ||||| ||| | ||||||||| || | ||||| |||||||||||||| ||| | Sbjct 233088 TTTGTAGGTTCTAATAATATAAACTTTTTAGAACCATGTGGTCAATTTGGTAGTAGAAAA 233147 Query 166109 GAAGGAGGTAAAGATTCTGCTGCATCAAGATATATTTATACCAAACCACATAAAATATTA 166168 |||||||| |||||| || |||| | || ||||||| ||||||| | | | || Sbjct 233148 GAAGGAGGAAAAGATGCTTCTGCGGCTAGGTATATTTTTACCAAATTGGCT--AGTTCTA 233205 Query 166169 AAATA--TATATTTAGAGAAGAAGATGACCCTATTTTAAATTAT 166210 || | ||||||| ||| | |||||||| ||||| || ||| Sbjct 233206 CAAGAAGCATATTTAACGAATATGATGACCCCATTTTGAAATAT 233249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632487639282240