Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20fragile_20[genbank_20GCA_5F000956335.1_202015-03-20] 248 sequences; 25,914,542 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq23 86.0 5e-12 >seq23 Length=358523 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 |||||||||||||| || ||||| |||| ||| | |||||| ||| | || |||||| Sbjct 176835 AAAATGCAAATATTCGTAAAAACATTAAGCGGAAGAACCATCACCCTGGATGTGGAGCCA 176776 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||| || | | | || ||| || |||| | || || || || || || Sbjct 176775 TCCGAAACCATTAGGAATGTTAAATCAAAAATTGAACATAAGGACGGAGTCCCACCTGAC 176716 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || || || || ||| | || ||||| ||||||||| ||| |||| || ||| Sbjct 176715 CAGCAGAGGCTAATATATTCAGGAAAACAATTGGAGGATGTCAGGTTTGTGGCTGACTAC 176656 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||||| || || || || || |||||| |||| Sbjct 176655 AACATCCAGAAGGAGTCCACCTTGCACTTGGT 176624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840352186264