Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20fragile_20[genbank_20GCA_5F000956335.1_202015-03-20] 248 sequences; 25,914,542 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq23 95.1 1e-14 >seq23 Length=358523 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 ||||||||||| || || ||||| |||| || | |||||| ||| | || |||| | Sbjct 176835 AAAATGCAAATATTCGTAAAAACATTAAGCGGAAGAACCATCACCCTGGATGTGGAGCCA 176776 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 ||| || | | | || ||| ||| |||| |||| || || || || || Sbjct 176775 TCCGAAACCATTAGGAATGTTAAATCAAAAATTGAACATAAGGACGGAGTCCCACCTGAC 176716 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 |||||||| || || ||| | || ||||| ||||||| | || |||| |||||| Sbjct 176715 CAGCAGAGGCTAATATATTCAGGAAAACAATTGGAGGATGTCAGGTTTGTGGCTGACTAC 176656 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||||| || |||||||| || |||||| |||| Sbjct 176655 AACATCCAGAAGGAGTCCACCTTGCACTTGGT 176624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398875594394872