Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20fragile_20[genbank_20GCA_5F000956335.1_202015-03-20] 248 sequences; 25,914,542 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq45 100 6e-16 >seq45 Length=210479 Score = 100 bits (110), Expect = 6e-16 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || ||||| | ||||||||||||||| || ||||| || ||||| || || ||||| || Sbjct 198056 CCATCTTCCAATTGTTTTCCAGCAAATATAAGTCTCTGCTGATCAGGTGGAATTCCCTCT 197997 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 || || ||||| || ||||||||||||||||| || || | || || ||||| || Sbjct 197996 TTGTCCTGAATTTTCGCTTTTACATTTTCAATTGTGTCCGATGACTCCACGTCCAAGGTG 197937 Query 82773 ATCGTCTTGCCTG 82785 || || || |||| Sbjct 197936 ATGGTTTTTCCTG 197924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981824080244072