Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20fragile_20[genbank_20GCA_5F000956335.1_202015-03-20] 248 sequences; 25,914,542 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq45 87.8 4e-12 >seq45 Length=210479 Score = 87.8 bits (96), Expect = 4e-12 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 206195 CAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAA-GCAA 206253 |||||||||| ||||| ||||| ||||| || |||||| | ||| ||||| || | Sbjct 197924 CAGGAAAAACCATCACCTTGGACGTGGAGTCATCGGACACAATTGAAAATGTAAAAGCGA 197983 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 || ||||| || ||||| |||||| || || || |||||||| || || ||||| Sbjct 197984 AA-ATTCAGGACAAAGAGGGAATTCCACCTGATCAGCAGAGACTTATATTTGCTGGAAAA 198042 Query 206314 CAGTTGGAAGATGGA 206328 || |||||||||||| Sbjct 198043 CAATTGGAAGATGGA 198057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181817044764408