Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20fragile_20[genbank_20GCA_5F000956335.1_202015-03-20] 248 sequences; 25,914,542 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq23 91.5 1e-13 >seq23 Length=358523 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575 ||||| ||||| || ||||||||||| |||| ||| | || || | ||||| || Sbjct 176636 GTGGACTCCTTCTGGATGTTGTAGTCAGCCACAAACCTGACA-TCCTCCAATTGTTTTCC 176694 Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635 || | | || | | |||||| || || || | || || || | || ||||||| ||| Sbjct 176695 TGAATATATTAGCCTCTGCTGGTCAGGTGGGACTCCGTCCTTATGTTCAATTTTTGATTT 176754 Query 134636 GACCGCGTCC-AATG-TGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || ||| |||| | ||||| | ||||| || || || |||||| | ||| |||| Sbjct 176755 AACAT--TCCTAATGGTTTCGGATGGCTCCACATCCAGGGTGATGGTTCTTCCGCTTAAT 176812 Query 134694 GTTTTAACGAAAATTTGCATTTTGTTT 134720 ||||| ||||| |||||||||||| || Sbjct 176813 GTTTTTACGAATATTTGCATTTTGATT 176839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396833264960