Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20fragile_20[genbank_20GCA_5F000956335.1_202015-03-20] 248 sequences; 25,914,542 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq45 102 2e-16 >seq45 Length=210479 Score = 102 bits (112), Expect = 2e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 177946 CAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAA 178005 |||||||||| |||||| | || ||||| || ||||| || || || || ||| | Sbjct 197924 CAGGAAAAACCATCACCTTGGACGTGGAGTCATCGGACACAATTGAAAATGTAAAAGCGA 197983 Query 178006 AGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAAC 178065 | |||||||||||||| ||||| || || || ||||| ||||||| || || ||||||| Sbjct 197984 AAATTCAGGACAAAGAGGGAATTCCACCTGATCAGCAGAGACTTATATTTGCTGGAAAAC 198043 Query 178066 AGCTCGAAGATGGA 178079 | | ||||||||| Sbjct 198044 AATTGGAAGATGGA 198057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203727375144112