Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F000576715.1_202014-02-03] 25,756 sequences; 16,303,117 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq6649 102 2e-16 >seq6649 Length=753 Score = 102 bits (112), Expect = 2e-16 Identities = 239/353 (68%), Gaps = 6/353 (2%) Strand=Plus/Plus Query 61084 TTTGTCAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAGAAA 61143 ||| | | ||||| ||||||||| | | ||||||||||||| | ||||| |||| Sbjct 259 TTTATAATGCATCCACATCTGAATTATTTGGAAAAGTTCAATGTTCTATTCAAAATGAAA 318 Query 61144 GGACTCCGTTTTATCCTCGTAGC-CCGTATGGTGTTGCAAAACTATACGCTTACTGGATT 61202 | || || |||||||| ||| | || |||| | | |||||| |||| || | | ||| Sbjct 319 GTACGCCATTTTATCC-AGTATCACCTTATGCTATAGCAAAATTATATGCACATTATATT 377 Query 61203 TGTAAAAATTACCGCGAGTCGTATGGAATG-TTTGTATGTAACTCGATTTGTTTCAATCA 61261 | |||||| | || || ||| ||| ||||||| ||| |||| || ||||| Sbjct 378 ACAATAAATTATAGAGAATCATATAATATGTTTTGTAT-TAATGGCATTTTATTTAATCA 436 Query 61262 CGAGAGTCCCAATAGAGGTCATCAGTTTGTGACTCGTAAAATTACGAAGGCGGTTGCAAA 61321 || ||||| | ||||| | ||||| || | |||||||| | | ||||||| Sbjct 437 TGAAAGTCCAAGAAGAGGAGAAACTTTTGTTACCAGAAAAATTACTAGAGGTATTGCAAA 496 Query 61322 TATTTTTAACGGTGTCGAAAAATGCATGTATC-TAGGAAACATAGACTCTAAAAGAGATT 61380 ||| || | ||| || ||| |||| |||| || ||||| | | ||||||| Sbjct 497 AATTCAAAAAAAATTACAAACATCCAT-TATCTTAGGTAATATAGATACATATAGAGATT 555 Query 61381 GGGGATATGCGGAAGATTATATCGAGGCTATGTGGTTGATGTTGCAACAAGAT 61433 |||| |||| | |||||| | ||||||| | ||||| |||||| || Sbjct 556 GGGGTCATGCAAAGGATTATGCATATGCTATGTATCTTATGTTACAACAAAAT 608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057474919402280