Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F000576715.1_202014-02-03] 25,756 sequences; 16,303,117 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq11001 105 2e-17 >seq11001 Length=546 Score = 105 bits (116), Expect = 2e-17 Identities = 261/396 (66%), Gaps = 0/396 (0%) Strand=Plus/Plus Query 111498 GGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCACGAC 111557 ||||| |||| || ||||||||| | || || || || || || | || ||||| || Sbjct 6 GGACCTATTTATGGTTTTCAATGGAGACATTTCGGAGCTGAATATACAAATATGCATGAT 65 Query 111558 TCATATGATTCACAGGGAACTGATCAATTACAGAATGTCATTGATCAAATTAAGAACAAC 111617 ||||| | || |||||||||| | ||| | || || |||||| || | Sbjct 66 AATTATGAAAATAAAGGTGTTGATCAATTAAAAAATATAATAAATTTAATTAAAAATGAT 125 Query 111618 CCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGGAAAAAATGGCA 111677 || || | | | ||| || || |||||||||| ||| | | || |||||||| Sbjct 126 CCTACAAGTAGAAGAATTCTTTTGTGTGCATGGAATGTAAAAGATCTTGACCAAATGGCA 185 Query 111678 CTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGCTTTCATGCCAA 111737 | || || |||||| || | || || |||||||| ||| || | | ||||| Sbjct 186 TTACCTCCTTGTCATATTTTATGTCAATTTTATGTTTTCGATGGAAAATTATCATGTATT 245 Query 111738 ATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCA 111797 |||||||| | || |||| | || || || || || ||||||||||| ||| | Sbjct 246 ATGTATCAAAGGTCATGTGATTTAGGACTAGGAGTACCTTTTAATATTGCTTCTTATTCT 305 Query 111798 CTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCATTCACGTT 111857 | ||||| | || || || | ||| | |||| | ||||| || |||||| Sbjct 306 ATTTTTACTCATATGATTGCACAAGTCTGTAATTTGCAACCTGCCGAATTTATACACGTT 365 Query 111858 ATCGGAGATGCGCATGTTTACACAAACCACATTGAT 111893 | ||| ||||||||||||| | || ||||| ||| Sbjct 366 TTAGGAAATGCGCATGTTTATAATAATCACATCGAT 401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302923494941192