Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F000576715.1_202014-02-03] 25,756 sequences; 16,303,117 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq5544 152 6e-32 >seq5544 Length=836 Score = 152 bits (168), Expect = 6e-32 Identities = 191/260 (73%), Gaps = 4/260 (2%) Strand=Plus/Minus Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGC 37498 |||| | |||||| ||||||||| ||||||||| |||| || ||||||||||| | ||| Sbjct 738 ATCTTTAATATAATTATCAATTAATAAACTATAGGTTTCTGAATGAATATTTTCTACAGC 679 Query 37499 TATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTT 37558 ||| |||||| |||||| | ||||| | || |||||| || | ||||| | | Sbjct 678 TATTTGAAAAGAATAAAATTTTTTTGCTTCTGTTATTTGAACCTCTCTTAAAAATTTACT 619 Query 37559 AGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTAT 37618 ||| || || || ||||| |||||||| |||||||| || || | |||| ||||| Sbjct 618 AGCCAAATTCTCTAATACTATACCATCACTTGCTGCAAAAAATGCTAACACATGCTTTAT 559 Query 37619 AAAATGTCTTTCATCATTTGAT--AATTTTTTCCAATCATTAATATCTTTTGATAAATCA 37676 ||||||| | |||| | | || ||||| | |||| || | ||| | ||||||||| Sbjct 558 AAAATGTTTCTCAT--TGTCATTCAATTTCTCAAAATCTTTTAAATCGCTAGATAAATCA 501 Query 37677 ACTTCATCAACGGTCCAAAA 37696 | ||| || | |||||||| Sbjct 500 ATTTCTTCTGCTGTCCAAAA 481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592126103606240