Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F000576715.1_202014-02-03] 25,756 sequences; 16,303,117 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq9540 116 5e-21 >seq9540 Length=598 Score = 116 bits (128), Expect = 5e-21 Identities = 152/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 194587 AAAATTTTTATAGGGCCAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATG 194646 ||||| ||||| || ||||||||||| || | | ||||| |||||| | |||||||| Sbjct 470 AAAATATTTATTGGACCAACTTATTATCAAAGATTAAAACATATGGTTGAAGATAAAATA 411 Query 194647 CATGCTAGAAGTCATGGGCAAGTAACTA-CTTTACATCGACAACCAAATTGTGGTCGTTC 194705 ||||| |||||| || | | |||||| ||||| ||||||||| || | || Sbjct 410 CATGCAAGAAGTAGAGGACCATTAACTATGATTACA-AGACAACCAACAGAAGGAAGATC 352 Query 194706 TCAAGGTGGAGGTTTAAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGC 194765 || ||| ||| ||||||||||||||||||||| ||| ||||| || ||||| | Sbjct 351 AAGAGATGGTGGTCTAAGATTTGGAGAAATGGAAAGAGATTGTATGATATCACATGGATC 292 Query 194766 TACTCAATTCTTAAATGAAAGAATGTTT 194793 | | || | ||||| |||||| | ||| Sbjct 291 TGCCAAAATGTTAAAAGAAAGATTATTT 264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632285969973280