Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F000576715.1_202014-02-03] 25,756 sequences; 16,303,117 total letters Query= NC_025447.1 Length=348532 Score E Sequences producing significant alignments: (Bits) Value seq11001 87.8 4e-12 >seq11001 Length=546 Score = 87.8 bits (96), Expect = 4e-12 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 279288 GTGCATGGAACGTTGGTGAGCTTGATGATATGACGTTACCACCTTGTCATAGCTT-TGTG 279346 |||||||||| || || ||||| | ||| | ||||| |||||||||| || ||| Sbjct 151 GTGCATGGAATGTAAAAGATCTTGACCAAATGGCATTACCTCCTTGTCATATTTTATGT- 209 Query 279347 CAATTTTGTGTAGTGCAAGGAAAACTAAGCTGTATTCTGCATCAACGCTCCGCTGATCTA 279406 ||||||| ||| | | |||||| || |||||| || ||||| | || |||| || Sbjct 210 CAATTTTATGTTTTCGATGGAAAATTATCATGTATTATGTATCAAAGGTCATGTGATTTA 269 Query 279407 TTTTTAGGAGTTCCATTTAATATCAGTAGTTACTCACTACTAACTCATATGATTGCACAA 279466 ||||||| || |||||||| | ||| || | | |||||||||||||||||| Sbjct 270 GGACTAGGAGTACCTTTTAATATTGCTTCTTATTCTATTTTTACTCATATGATTGCACAA 329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1114803194897964