Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F000576715.1_202014-02-03] 25,756 sequences; 16,303,117 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq3755 255 2e-62 seq5544 196 1e-44 seq11001 179 1e-39 seq9932 152 2e-31 seq996 152 2e-31 seq5718 140 1e-27 seq9540 136 1e-26 seq6649 134 4e-26 seq16906 127 6e-24 seq6281 127 6e-24 seq1904 111 5e-19 seq5672 109 2e-18 seq125 98.7 3e-15 seq6080 95.1 4e-14 seq16374 87.8 5e-12 seq5887 86.0 2e-11 >seq3755 Length=1024 Score = 255 bits (282), Expect = 2e-62 Identities = 412/583 (71%), Gaps = 12/583 (2%) Strand=Plus/Minus Query 182712 TTTTCATCATTTATTATACTTTGCATTTGAAAACAATATCCTTCAAGATTATTTTTAGCC 182771 |||||||| | || | | ||| | | | ||||||| ||| || || ||| | || Sbjct 577 TTTTCATCTTGTAATGTGTTTTTAACGTTATAACAATAATTTTCTAGGTTGTTTCTTGCT 518 Query 182772 TCAATACTTCCTTTAAATTCCTCATCTTCTTTAGCATACTTTTCAGCATCCATTGTC-AT 182830 || || || |||| || |||||||||| ||| ||||| ||||| |||| | || Sbjct 517 TCGATTCTGTTTTTATTTTGTTCATCTTCTTCTTTATATTTTTCTGCATC-ATTGACCAT 459 Query 182831 TCTTTCTATTTCATCTTTAGAAAGATGACCTGCATCATTTGTAATTACTACATTACTAGT 182890 | || || ||||| || || | ||| |||||||||||| | || || | | Sbjct 458 ACGATCGATATCATCCTTTGATAATCTTCCTTTATCATTTGTAAT-AGTAATTTGATTTT 400 Query 182891 TACT-CCAGTTGATTTTTCAAGTGCGCTAACATTTAAAATACCATTAGAGTCAACATCAA 182949 | || || ||| || | ||| | ||||||| |||||||||| |||| ||||| Sbjct 399 GTTTACCCGTACCTTTATCTAATGCTGTTACATTTAGTATACCATTAGCATCAATATCAA 340 Query 182950 ATGATACTTCAATCTGTGGAACACCTCGTGGCATTGGTGGAATTCCAGTTAAAGTAAATT 183009 ||| |||||||| ||||| |||| || ||| |||||| || || ||| ||||| Sbjct 339 ATGTAACTTCAATTTGTGGCACACTTCTTGGTGCTGGTGGGATACCTTCTAATTGAAATT 280 Query 183010 CACCTAATTTATTATTATCTTTAGTTCTTGCTCTCTCGCCTTCATATACTTGAATAGTAA 183069 |||||| |||||||||||||||| | ||| || |||||||| |||||||| || Sbjct 279 TTCCTAATAAATTATTATCTTTAGTTAAGGATCTTTCTCCTTCATACACTTGAATTAAAA 220 Query 183070 CTGCTGGCTGATTATCACTATAAGTAGAAAAAACTTGCTTTTTATTAATAGGAATAGTTG 183129 | |||| ||||||||| ||| |||| ||| | ||| ||||| || | || ||||||| Sbjct 219 CACCTGGTTGATTATCAGCATATGTAGTAAAGATTTGATTTTTTTTGGTTGGTATAGTTG 160 Query 183130 AATTTCGCGGAACAATTACAGTCATTACTTCTCTGGCAGTTTCTAATCCTAATGATAATG 183189 ||||| || | | ||||| || | | || |||||||| |||||||| |||| Sbjct 159 TATTTCTTTCAATTAATTTTGTCATGACACCACCTGCTGTTTCTAAGCCTAATGACAATG 100 Query 183190 GTGCTACATCTAGTAATAATAAATCTGATGTTTTATCTGAT--TTAATATCACT--TAAA 183245 | ||||||| ||||||||| || | | | ||||| || || || || |||| Sbjct 99 GACAGACATCTAATAATAATAAGTC---TTTGACAGCTGATGATTGATCTC-CTGATAAA 44 Query 183246 ATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTG 183288 || || ||||| ||||||||||||||||||||||||||||||| Sbjct 43 ATAGCTGCTTGTACAGCTGCACCATATGCAACAGCTTCATCTG 1 Score = 194 bits (214), Expect = 5e-44 Identities = 343/500 (69%), Gaps = 0/500 (0%) Strand=Plus/Plus Query 350280 CAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGA 350339 ||||||||||||||||||||||||| ||||| || ||| |||||||||| ||| || | Sbjct 1 CAGATGAAGCTGTTGCATATGGTGCAGCTGTACAAGCAGCTATTTTATCAGGAGATCAAT 60 Query 350340 GTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAA 350399 || | | || ||||| || ||||||| |||| | || | || ||||||| Sbjct 61 CATCAGCTGTCAAAGACTTATTATTATTAGATGTCTGTCCATTGTCATTAGGCTTAGAAA 120 Query 350400 CTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGT 350459 | | |||| || ||||| | ||| ||||||| ||| |||| || ||||| Sbjct 121 CAGCAGGTGGTGTCATGACAAAATTAATTGAAAGAAATACAACTATACCAACCAAAAAAA 180 Query 350460 CCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAG 350519 |||| ||| |||||| ||| |||||||| |||| || ||||||||| | ||||| Sbjct 181 ATCAAATCTTTACTACATATGCTGATAATCAACCAGGTGTTTTAATTCAAGTGTATGAAG 240 Query 350520 GTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAATTC 350579 | ||| | | ||||||||||||||| | | ||| ||||| || | || | Sbjct 241 GAGAAAGATCCTTAACTAAAGATAATAATTTATTAGGAAAATTTCAATTAGAAGGTATCC 300 Query 350580 CACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTA 350639 ||||| || ||| | || || || |||||||| | || ||||||||| | ||||||| Sbjct 301 CACCAGCACCAAGAAGTGTGCCACAAATTGAAGTTACATTTGATATTGATGCTAATGGTA 360 Query 350640 TTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAAAGTAGTAAGGTAGAAATTACTA 350699 | ||||||| || ||| | || ||| | |||||| | | | | ||||| | Sbjct 361 TACTAAATGTAACAGCATTAGATAAAGGTACGGGTAAACAAAATCAAATTACTATTACAA 420 Query 350700 ATGATAAATCTAGACTTTCAAAAGAAGATATTGAGAAAATGACACAAGATGCCGAATCAT 350759 |||||||| ||| | ||||| || ||||| || ||| | ||||| ||| || Sbjct 421 ATGATAAAGGAAGATTATCAAAGGATGATATCGATCGTATGGTCAATGATGCAGAAAAAT 480 Query 350760 ATGCTAAGGAAGATGAAGAA 350779 || | ||||||||| || Sbjct 481 ATAAAGAAGAAGATGAACAA 500 >seq5544 Length=836 Score = 196 bits (216), Expect = 1e-44 Identities = 274/377 (73%), Gaps = 12/377 (3%) Strand=Plus/Minus Query 223880 ATCCATTTTAATGCCCAATCTGCTTTTTTCTTAATACAAGAAAAATTTTCTAAAGCATTA 223939 ||||||||| |||||| |||||| || || | | || | |||||||| ||||| | Sbjct 821 ATCCATTTTGCTGCCCATAATGCTTTATTTTTTACAGCAGGGATATTTTCTATAGCATGA 762 Query 223940 AACAACTTCGATTTCTCATTATGATCACTTATATATGTTTCTATTAATTGACTATACATT 223999 || || || || | || || | ||| | ||||| | || |||||| |||||| || Sbjct 761 AATAAATTTAATCTTTCTTTTTCATCTTTAATATAATTATCAATTAATAAACTATAGGTT 702 Query 224000 ATTGAATGTATATTTTCCATTGCTATTTGAAATCCATAAAATGCTTTTGCCTCTGCTATT 224059 |||||| |||||||| | ||||||||||| ||||||| |||||| |||| |||| Sbjct 701 TCTGAATGAATATTTTCTACAGCTATTTGAAAAGAATAAAATTTTTTTGCTTCTGTTATT 642 Query 224060 TGTACTTCTGTCATAAATCTTAATC-CTAAATTCTCTAATACTATACCATCACTTGCCGC 224118 || || ||| | | |||| ||| | | ||||||||||||||||||||||||||||| || Sbjct 641 TGAACCTCTCTTAAAAAT-TTACTAGCCAAATTCTCTAATACTATACCATCACTTGCTGC 583 Query 224119 AAAAAATGCCAATATCAT-AGAAATAAAATATCTTTCA---TCATT-GGTTAATGATAAC 224173 ||||||||| || | ||| ||||||| | | ||| ||||| || | | || Sbjct 582 AAAAAATGCTAACA-CATGCTTTATAAAATGTTTCTCATTGTCATTCAATTTCTCAAAAT 524 Query 224174 CAGTGCGATAAATCTTTTGATAAATCAACTTCTTGTGCTCTCCAAAAACAATCTTCTGCT 224233 | | |||||| | |||||||||| ||||| |||| ||||||| || |||| ||| Sbjct 523 CTTT----TAAATCGCTAGATAAATCAATTTCTTCTGCTGTCCAAAATGAAGCTTCAGCT 468 Query 224234 TTTTTATACATTTCCCA 224250 || || || | ||||| Sbjct 467 TTCTTGTAAAAATCCCA 451 >seq11001 Length=546 Score = 179 bits (198), Expect = 1e-39 Identities = 326/470 (69%), Gaps = 19/470 (4%) Strand=Plus/Plus Query 390841 ATTTAGGGCCAGTATATGGACATCAATGGAGACATTTTAATGCACCATATACAAACTGTG 390900 ||||||| || | ||||| ||||||||||||||| || ||||||||| | || Sbjct 1 ATTTAGGACCTATTTATGGTTTTCAATGGAGACATTTCGGAGCTGAATATACAAA-TATG 59 Query 390901 AAACAGACT-ATACAGATAAAGGTGTAGATCAATTAGAATATATTATTAATTGTCTAAAA 390959 | | | | || | |||||||||| ||||||||| || |||| || |||| | ||| Sbjct 60 CATGATAATTATGAAAATAAAGGTGTTGATCAATTAAAAAATATAATAAATTTAATTAAA 119 Query 390960 ---GATCCAAAAGAGAGATATTCAAGAAGACTAGTTATGTCAGCCTGGAATCCTAGTCAA 391016 ||||| | | | | |||||| | || ||| || |||||| | | Sbjct 120 AATGATCCTACA-------AGT--AGAAGAATTCTTTTGTGTGCATGGAATGTAAAAGAT 170 Query 391017 CTAGGAGAAATGGCATTACCTCCGTGCCATATTTTAGCTCAATTTAATGTTGTAAAAGAT 391076 || | |||||||||||||||| || ||||||||| ||||||| ||||| | | | Sbjct 171 CTTGACCAAATGGCATTACCTCCTTGTCATATTTTATGTCAATTTTATGTTTTCGATGGA 230 Query 391077 GAACTTTCTTGTTCATTAT--ATCAGAGAAGTGGAGATGTAGGTTTAGGAGTTCCATTTA 391134 || | || ||| ||||| |||| || | ||| |||| ||||||| || |||| Sbjct 231 AAATTATCATGT--ATTATGTATCAAAGGTCATGTGATTTAGGACTAGGAGTACCTTTTA 288 Query 391135 ATATTGCATCTTATAGTATTTTAACTCATATAATAGCAAAACATTGTAACTTAAAAGCTA 391194 ||||||| |||||| |||||| |||||||| || ||| || ||||| || || || Sbjct 289 ATATTGCTTCTTATTCTATTTTTACTCATATGATTGCACAAGTCTGTAATTTGCAACCTG 348 Query 391195 AAGAATTTGTATATTATTTAGGAAATACCCATATTTACGATGATCATATTGATGAATTAA 391254 |||||| || | |||||||||| | ||| |||| || |||| || ||| |||| Sbjct 349 CCGAATTTATACACGTTTTAGGAAATGCGCATGTTTATAATAATCACATCGATAGTTTAA 408 Query 391255 AAATACAAATTGAGAGAAAGCCATATAAATTTCCAAAAATAAACATTAAA 391304 |||| ||| || | |||| |||||| ||| |||| | | || |||||| Sbjct 409 AAATTCAACTTAATAGAATACCATATCCATTCCCAACACTTAA-ATTAAA 457 >seq9932 Length=583 Score = 152 bits (168), Expect = 2e-31 Identities = 260/376 (69%), Gaps = 2/376 (1%) Strand=Plus/Plus Query 67879 AAGAAACGTCTAACTAGTGAAATTAAAGTTGCACAATTTAGTGGTTATGTTTCAGAACAT 67938 |||||| | ||| | |||| ||| ||||||||||| ||||||| || | |||||| Sbjct 51 AAGAAA--TTTAAGAAATGAATGTAAGGTTGCACAATTAGTTGGTTATATTGCTGAACAT 108 Query 67939 TCAGGCTATCATCACGGTGAAGCTAGTTTAAATTCATCAATTGTAGGTTTAGCTCAGAAT 67998 | |||||||| |||||| | |||| | | ||||| || | | ||||| | Sbjct 109 AGTGCATATCATCATGGTGAATCATCTTTACAACAAACAATTATAAATATGGCTCAAACA 168 Query 67999 TTTGTTGGATCAAATAATATTAATTTACTAGAACCAAAAGGTCAATTTGGAACTAGATTA 68058 ||||| ||||| |||||||| || || |||||||| || || ||||| | |||| | Sbjct 169 TTTGTAGGATCTAATAATATCAACTTTTTAGAACCATGTGGACAGTTTGGTAGTAGAAAA 228 Query 68059 CTTGGAGGAAAAGATGCTGCATCTGAAAGATATATATTTACACATCTAAATACTTTAACT 68118 || || |||||||| | | | ||||||||||||||| | | || | ||| Sbjct 229 GAAGGTGGTAAAGATGCATCTGCAGCAAGATATATATTTACCAAATTGGCTAGCTCAACA 288 Query 68119 AGACTTATCTTTAGACAAGAAGATGATAATATTCTTGAATATTTAGAAGATGATGGTGAT 68178 ||| ||| |||| || | |||||| ||| | |||||||| | || || || | Sbjct 289 AGAAGTATATTTAATGAATATGATGATCCTATATTAAAATATTTAAATGAAGAAGGACAG 348 Query 68179 AAAGTTGAGCCAATCTATTATGTTCCTATTATTCCTATGATTTTAGTAAATGGTTCAAAA 68238 ||| |||| ||| |||||| | || ||||||| | || || |||||||||| || Sbjct 349 AAAATTGAACCACAATATTATATACCAGTTATTCCAACAATATTGGTAAATGGTTGTGAA 408 Query 68239 GGGATTGGCACTGGAT 68254 || ||||| || |||| Sbjct 409 GGTATTGGTACAGGAT 424 >seq996 Length=1774 Score = 152 bits (168), Expect = 2e-31 Identities = 255/366 (70%), Gaps = 6/366 (2%) Strand=Plus/Plus Query 378133 TCTCCATATGAGAATTGAACAATTTTATCTTTAT-TG--TTTCTTACAGTCATATCATAT 378189 ||||||||| | ||||||| ||| |||| || || ||||||||||| |||||||| Sbjct 1 TCTCCATATAAAAATTGAATAAT---ATCTCCATATGAATTTCTTACAGTTCTATCATAT 57 Query 378190 CTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGACTA 378249 ||||| | |||||| | ||||| || | || || ||||| || |||| | Sbjct 58 TGTACCATAACATCTTCCATGGCTTTTATTAATCTTCTTTGTATATACCCTGTTTCAGAT 117 Query 378250 GTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAATTCA 378309 |||||| |||||||||||| | ||| | | ||| |||||||||||||| |||| ||| Sbjct 118 GTTTTACATGCAGTATCAATAATACCTTCTCTACCTCCCATTGCATGGAAAAATACTTCT 177 Query 378310 GTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAATCA 378369 || || | ||||| | | ||||| | | ||||||||| | || || | Sbjct 178 TGTGGTGTTAATCCACTTAAATATGAATTAGATACAAATCCTCTACTTTCAGGACCATAA 237 Query 378370 TCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTTCCA 378429 ||| |||| || |||| ||||| | | || | ||| ||| |||| |||| |||||| Sbjct 238 TCAAATTTAATAAAATGTGGTAAAGATCTATGATTAAAACCAAATGGTATTCTTTTTCCT 297 Query 378430 TCAACATTCTGTTGACCAAGTGCAGAAACCATTTGAGCAATATTTAAATCACTACCTTTA 378489 |||||||| |||||||| | || | ||||||| ||||| | | | |||||| Sbjct 298 TCAACATTTTGTTGACCTACACATGATATAATTTGAGATATATTAATAATAGAACCTTTT 357 Query 378490 GACCCA 378495 || ||| Sbjct 358 GATCCA 363 Score = 89.7 bits (98), Expect = 2e-12 Identities = 137/193 (71%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 379273 TTCATTTCATCACCATCAAAATCAGCATTATATGGCTTAGTATCTCCTACATTCATTCTA 379332 ||||||||||| ||||| ||||| ||||||||||| ||| || || ||| | | | Sbjct 1516 TTCATTTCATCTCCATCGAAATCGGCATTATATGGAGATGTAACTGATAAATTTAAACGA 1575 Query 379333 AAAGTATCACCTTGATATAAAATTTTAACAATATGACACATCATTGATAATCTATGAAGT 379392 || || | | || ||| |||||| | |||||| ||| || | | |||| | | Sbjct 1576 AATGT-TGAATATG--GTAATATTTTAGCCTTATGACCCATAATACTCATTTTATGTAAT 1632 Query 379393 GTAGGCTGACGATTAAATAAGACACCATCCCCATCCATCATATGTCTATGTACTTTATCT 379452 | |||||| | ||||||||| | | ||| |||| |||||||||| | ||||||| | Sbjct 1633 GAAGGCTGCCTATTAAATAAAATATAATCTTCATCTGTCATATGTCTTTCAACTTTATAT 1692 Query 379453 CCATTTTGTAATT 379465 |||| | ||||| Sbjct 1693 CCATACTCTAATT 1705 >seq5718 Length=822 Score = 140 bits (154), Expect = 1e-27 Identities = 247/352 (70%), Gaps = 10/352 (3%) Strand=Plus/Plus Query 266266 ATAATTATACTCATTGTGAAATTCATCCAAGTACATTATTAGGTATTTTAGCATCTTGTA 266325 |||||| ||| ||||||||||| |||||| | ||||||| ||| |||||| | Sbjct 452 ATAATTTTACACATTGTGAAATACATCCATCATTAATATTAGGAGTTTGTGCATCTATAA 511 Query 266326 TTCCATTTCCAGAACATAATCAAGCACCTCGTCTAACATATCAATGTGCAATGGGTAAAC 266385 |||| ||| || ||||||||| |||||| || |||||| |||| ||||| |||| Sbjct 512 TTCCTTTTAGTGATCATAATCAAAGTCCTCGTAATACTTATCAAAGTGCTATGGGAAAAC 571 Query 266386 AGGCTATGGGTATCTATGTTACAAATTTTAATAATAGAATGGATAAAACAGCATATGT-T 266444 | |||||||| || ||||| || |||||||||| |||| | |||| | ||| || | | Sbjct 572 AAGCTATGGGAATATATGTAACTAATTTTAATATTAGATTAGATACATTAGCTCATTTAT 631 Query 266445 CATACTTATGGTATGAGACCTTTAGTAGATACTCGTGTAATG---AATTTACTAAATTTA 266501 ||| ||| | ||| |||||| ||| | ||| |||||| |||| Sbjct 632 TATA-TTACCCACAAAAACCATTAGTATGTACAAAGGCTATGGAATATTTAC--GTTTTA 688 Query 266502 CATAAAATTCCATCTGGTGCACAAGTAATAGTAGCTATTATGACACATACTGGGTATAAT 266561 | || | ||| ||||| | | ||| |||||||||||| |||| || |||||| Sbjct 689 GA-GAACTCCCAGCTGGTATTAATGCAATTGTAGCTATTATGTGTTATACAGGTTATAAT 747 Query 266562 CAAGAAGATAGTAT-ATTATTTAATAAAGGATCTATTGAAAGAGGACTATTT 266612 |||||||||||| | |||| | || || ||||||||| | || ||||| Sbjct 748 CAAGAAGATAGTTTGATTA-TGAACCAATCATCTATTGATCGTGGTTTATTT 798 >seq9540 Length=598 Score = 136 bits (150), Expect = 1e-26 Identities = 326/483 (67%), Gaps = 26/483 (5%) Strand=Plus/Minus Query 267205 AAGATATTTGTAAAGAATTACAAAATATTGGTTATGAATCTAAAGGTAATGAAATATTAT 267264 |||| |||| || ||||||| ||| ||||||||||| | || |||||||| |||| Sbjct 562 AAGAAATTTCACAAAAATTACATAATCTTGGTTATGAAAAATATGGAAATGAAATGTTAT 503 Query 267265 ATGATGGAT-TATCTGGTGAACAGATGAGAACAAATGTATTTATCGGGCCAGCATTTTAT 267323 || ||||| || | | ||| || |||| ||||||| || ||| | | |||| Sbjct 502 ATAATGGACATAACGGAAGAATGTTAAAGTCCAAAA-TATTTATTGGACCAACTTATTAT 444 Query 267324 CAAAGATTAAAACATATGGTTAGTGATAAACAACATAGTAGAAGTATTGGTCCTATGGTA 267383 ||||||||||||||||||||| |||||| |||| ||||||| || || || || Sbjct 443 CAAAGATTAAAACATATGGTTGAAGATAAAATACATGCAAGAAGTAGAGGACC-AT--TA 387 Query 267384 AAT---TTAACTCGTCAACCAGCGGAAGGTAGATCTCGTGATNNNNNNNNNNNNNNNNNN 267440 | | | || | |||||| | ||||| ||||| | ||| Sbjct 386 ACTATGATTACAAGACAACCAACAGAAGGAAGATCAAGAGATGGTGGTCTAAGATTTGGA 327 Query 267441 NAAATGGAAAAAGATGCAATGGTTGCACACGG---TGCATCTAGATTTAATAAAGAAAGA 267497 ||||||||| |||| ||| | |||| || ||| | | || | | ||||||||| Sbjct 326 GAAATGGAAAGAGATTGTATGATATCACATGGATCTGC--CAAAATGTTA-AAAGAAAGA 270 Query 267498 TTACTCGATGCATCAGATAAATTTAAAATCCAAGTATGTAAAAAATGTGGTCT-TATTG- 267555 ||| | || | | ||| || | | || || ||| | || |||||| | | ||| Sbjct 269 TTATTTGAAGAAAGTGATGCATATCGTGTACATGTTTGTGATAATTGTGGTTTATGTTGT 210 Query 267556 -CTGCTTATAATAACAAAGA-GCATATTCATATA-TGTAAAACTTGTAATAATACAACAG 267612 |||| ||| ||||||| | |||||| || || ||| |||||||| || |||| Sbjct 209 ATTGCTGATATTAACAAAAATGCATATGAATGTACTGT-----TTGTAATAGTAAAACA- 156 Query 267613 AATTTAGTA-ATGTATATTTACCATATGCTTGTAAATTATTATTTCAAGAATTAATAACA 267671 || || | | | |||||||||||||| |||||||| ||||| |||||||| || ||| Sbjct 155 AACATATCACAAATTTATTTACCATATGCATGTAAATTGTTATTCCAAGAATTGATGACA 96 Query 267672 ATG 267674 ||| Sbjct 95 ATG 93 Score = 93.3 bits (102), Expect = 1e-13 Identities = 173/253 (68%), Gaps = 6/253 (2%) Strand=Plus/Plus Query 250786 TTCTTTTAAAAAATAAGCTAATCCATGAGCAACAATAGCATCTCTTTCTTGTTCCCCAAC 250845 ||||||||| | | || ||||||| | | ||| ||||||||| ||| |||| Sbjct 273 TTCTTTTAACATTTTGGCAGATCCATGTGATATCATACAATCTCTTTCCATTTCTCCAAA 332 Query 250846 CCGAAGTCCGCCATCATTTGCTCTGCCTTGTACGGTTTGTCTTGTTAAAACAGTTCGAGG 250905 | || || ||||| ||| ||| |||| | | ||||||||| | | |||| || Sbjct 333 TCTTAGACCACCATCTCTTGATCTTCCTTCTGTTGGTTGTCTTGTAATCATAGTTAATGG 392 Query 250906 ACCTTTTGCACGATAATTAATTTTATCTTTTACTATATGTTTTAATCTCATATAATATGT 250965 ||| | | || |||||||||| || |||||||||||||| |||||| || Sbjct 393 TCCTCTACTTCTTGCATGTATTTTATCTTCAACCATATGTTTTAATCTTTGATAATAAGT 452 Query 250966 TGGCCCAATAAATATATT---CATTCTCATTTGTTCACCTGTTTCTCCACTATATAATAT 251022 ||| ||||||||||| || | || |||| | || | | |||| ||||||| || Sbjct 453 TGGTCCAATAAATATTTTGGACTTTAACATTCTT---CCGTTATGTCCATTATATAACAT 509 Query 251023 TTCATTTGCAGAT 251035 ||||||| || || Sbjct 510 TTCATTTCCATAT 522 >seq6649 Length=753 Score = 134 bits (148), Expect = 4e-26 Identities = 234/331 (71%), Gaps = 17/331 (5%) Strand=Plus/Plus Query 109976 TGAAATATATAATTTAGGAGCACAAAGTCATGTACATATATCATTTGATATACCTGAATA 110035 |||||||||||| |||| ||||||||||||||| | || ||||| || ||||| || Sbjct 122 TGAAATATATAACTTAGCTGCACAAAGTCATGTAAAAGTAAGTTTTGAAATGCCTGAGTA 181 Query 110036 TACTGCACAAGTTGATGGCATTGGAGTA--TTAAAATTATTAGAATGTATAAGGCAATTA 110093 ||| | ||| || | || | ||| |||| | |||||||| | ||||| ||| Sbjct 182 TACGACTGAAGCAACTG-CTTTAG-GTACCTTAAGAATATTAGAAGGAATAAG--AAT-- 235 Query 110094 GATATAAAAGATAGAGAGAAAATAAGATTTTATCAAGCGGGAACTAGTGAAATGTTTGGA 110153 || ||||| || | || || | ||||||| | || || |||| | |||||| Sbjct 236 -ATC-AAAAGTTAAA---AATATTAAATTTTATAATGCATCCACATCTGAATTATTTGGA 290 Query 110154 GAAGTATTACAAATACCA--CAAAATGAAATGACACCATTTAATCCACAATCACCCTATG 110211 |||| | | | | | |||||||||| || |||||| ||||| |||||| |||| Sbjct 291 AAAGT--TCAATGTTCTATTCAAAATGAAAGTACGCCATTTTATCCAGTATCACCTTATG 348 Query 110212 CATCAGCAAAAGTTTATAGTCATTATATTGTAAAAAATTATAGAGAAAGTTATAATTTAT 110271 | ||||||| | ||| ||||||||| || ||||||||||||| |||||| | | Sbjct 349 CTATAGCAAAATTATATGCACATTATATTACAATAAATTATAGAGAATCATATAATATGT 408 Query 110272 TTGCGTGTAATGGTGTTTTATTTAATCATGA 110302 || |||||| |||||||||||||||| Sbjct 409 TTTGTATTAATGGCATTTTATTTAATCATGA 439 >seq16906 Length=405 Score = 127 bits (140), Expect = 6e-24 Identities = 148/197 (75%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 312745 TGGCATAGTAGCACTAAATAAAGCTATTTGAATATTATTTGATAAGTATTGAAAAACACT 312804 |||||| |||||| ||||||||| | |||||||| | ||| | | |||||| Sbjct 135 TGGCATTGTAGCAGAAAATAAAGCAACTTGAATATCTGGTACTAATTTCTTAAAAACTTC 194 Query 312805 ATATATCTGTTCTTTAAATCCAGATGATAACATTTCATCTGCTTCATCTAATACCACTAG 312864 |||||| || | |||||||| ||||||||||||||| ||||||||||||| | || Sbjct 195 ATATATTTGAGCCTTAAATCCTCTTGATAACATTTCATCAGCTTCATCTAATATAAATAA 254 Query 312865 TTTTATTTTATCAGTTACTATATGCTTTCTTCTC-ATCATATCATGAATTCTACCTGGGC 312923 |||| | ||||| ||| ||| | |||| || |||||||||| || |||||||||| Sbjct 255 CTTTAATCTATCAACACCTAAATG-TCTCTTGTCAATCATATCATAAACTCTACCTGGGG 313 Query 312924 AACCTACTATAATATGT 312940 |||||| | |||||| Sbjct 314 TACCTACAACCATATGT 330 >seq6281 Length=778 Score = 127 bits (140), Expect = 6e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 223424 ACTCTTCTTTCaaaaaaaTTTGTTTTTCCTTCTATACTTATCATTTCCATAAAATCAAAC 223483 || ||| | || ||||| ||||||||||||| | || | ||||| ||| || Sbjct 478 ACCCTTTTCTCGAAAAAGTTTGTTTTTCCTTGAAGTGAAATTAAGTCCATCCAATTGAAT 419 Query 223484 GGATTACTAGAATTATAAATTTTATTATTTCCTAATTGAACTGCTAATCTATCTGCTACA 223543 ||||| | |||| |||||||| |||||| || |||||||||||| ||| Sbjct 418 GGATTTTTTGAATGGAAAATTTTAGAGCATCCTAAACATTCTAATAATCTATCTGCAACA 359 Query 223544 AATTCTATATATTGTGACATTAATTTACTATTCATACCTATTAAATTACACGGCAATGCT 223603 |||||||||||||| ||||| | | || ||||||||||||||||| ||| || |||| | Sbjct 358 AATTCTATATATTGAGACATAAGTCTAGAATTCATACCTATTAAATCACATGGTAATGAT 299 Query 223604 TCACAGATAAACTCTTTTTCTATTTCTACCGCATTTTT 223641 ||||| ||||| | |||| | |||||| || | ||| Sbjct 298 TCACATATAAAAGATCTTTCAACTTCTACAGCTTCTTT 261 Score = 118 bits (130), Expect = 3e-21 Identities = 163/227 (72%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 399627 ATTATTAAAGAAGCAGTTGAAATTGAAAAAGAATTTATATGTGATGCTCTTCCTTGTAGA 399686 ||| |||||||||| || ||| |||||| | ||||||||||| | | || ||| Sbjct 255 ATTGTTAAAGAAGCTGTAGAAGTTGAAAGATCTTTTATATGTGAATCATTACCATGTGAT 314 Query 399687 TTAATTGGAATGAATTCAACATTAATAACACAATATATTGAGTTTATTGCTGATAGATTA 399746 ||||| || |||||||| | | | || | |||||||| || ||| |||| ||||||||| Sbjct 315 TTAATAGGTATGAATTCTAGACTTATGTCTCAATATATAGAATTTGTTGCAGATAGATTA 374 Query 399747 AGTTTACAA---TTAGATTGTGATAAAATTTATAATGTTACAAATCCATTTGATTGGATG 399803 ||| || |||| || |||||||| || | ||||||||| |||||||| Sbjct 375 ---TTAGAATGTTTAGGATGCTCTAAAATTTTCCATTCAAAAAATCCATTCAATTGGATG 431 Query 399804 GAAATGATTAGTCTTGAAGGTAAAACTAAtttttttGAAAAAAGAGT 399850 || | ||| ||| |||| ||||| || ||||| || ||||| || Sbjct 432 GACTTAATTTCACTTCAAGGAAAAACAAACTTTTTCGAGAAAAGGGT 478 >seq1904 Length=1198 Score = 111 bits (122), Expect = 5e-19 Identities = 151/202 (75%), Gaps = 8/202 (4%) Strand=Plus/Minus Query 221772 AAATTAGATATTACCTCAGTATCTGTTTCTGATATAAATTTA-TATCCTTTACTAATTAA 221830 ||||||| || |||||| ||||| || | |||| ||||| | ||| ||| |||| || Sbjct 447 AAATTAGCTACTACCTCTGTATCAGTATTTGATTTAAATGGAATATTATTTTTTAATAAA 388 Query 221831 CATATCTTTTATTACATTAAAATTTGTAATTATACCATTATGTACAACAATTAttttttt 221890 || | ||| ||| | || ||||| ||||||||||||||| || | | |||| || Sbjct 387 AATGT-TTTAATTTCTCTATAATTTTCAATTATACCATTATGAACTATACTTATACGTTC 329 Query 221891 ATTCATAGAT--ATATGCGGATGAGCATTTATATCACTTCTTGCA-CCGTGTGTTGCCCA 221947 | |||| || | ||| |||||||||||| |||| || || || || ||||||||||| Sbjct 328 AC-CATA-ATCAACATGTGGATGAGCATTTTCATCAGTT-TTACATCCATGTGTTGCCCA 272 Query 221948 TCTTGTATGACCAATTGCTATA 221969 || |||||| ||||| ||||| Sbjct 271 TCGTGTATGTGCAATTCCTATA 250 >seq5672 Length=825 Score = 109 bits (120), Expect = 2e-18 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 251162 AATTGTCCAATGGTCATTCTACTAGGCAATGCGTGTGGATTAATAATAATATCTGGACGA 251221 || |||||||| ||||| | | ||| | ||| ||||| || ||||||||||| ||| | Sbjct 745 AAATGTCCAATAGTCATACGAGAAGGAACTGCATGTGGGTTCATAATAATATCAGGAAAA 686 Query 251222 ATTCCATCTTCAGTAAAAGGCATATTTTTCTCATCAATAACTAA-ACCAATAGTACCTTT 251280 || ||| | | |||| |||||| | |||| || ||| ||| |||||||||||| || Sbjct 685 ATACCAAGTGAACTAAATGGCATA-TCTTCTGTTCTATATGTAATACCAATAGTACCCTT 627 Query 251281 TTGTCCACATCTACTACAAAACTTATCTCCAATTGCAGGAATTCTTTCATCACGAACTCT 251340 ||||||| ||||||| || ||||| |||||| || || | | | ||||||| | Sbjct 626 TTGTCCATGTCTACTAGCGAATTTATCACCAATTTGTGGTATACGTACTGAACGAACTTT 567 Query 251341 TACTTTTGCTaa 251352 || ||||| || Sbjct 566 AACCTTTGCAAA 555 Score = 104 bits (114), Expect = 7e-17 Identities = 144/199 (72%), Gaps = 6/199 (3%) Strand=Plus/Plus Query 266929 ATAATTTTGCAAAAGTTCGTCTAAGAACATTACGCCAACCAGTAATCGGCGATAAATTTT 266988 |||| |||||||| ||| | | || |||| |||| ||| || |||||||| Sbjct 550 ATAAATTTGCAAAGGTTAAAGTTCGTTCAGTACGTATACCACAAATTGGTGATAAATTCG 609 Query 266989 CTAGTCGCCACGGACAAAAAGGTACCATTGGTACGAT-TATTCCTGAA--GAAAATATGC 267045 ||||| | || |||||||| ||||| ||||||| | ||| ||| ||| |||||| Sbjct 610 CTAGTAGACATGGACAAAAGGGTACTATTGGTATTACATATA---GAACAGAAGATATGC 666 Query 267046 CATTTAATGAAGATGGAATTAGACCTGATATTATTATTAATCCTCATGCTATTCCTAGTC 267105 |||||| | | ||| ||| |||||||||||||| || || ||||| ||||| || Sbjct 667 CATTTAGTTCACTTGGTATTTTTCCTGATATTATTATGAACCCACATGCAGTTCCTTCTC 726 Query 267106 GTATGACAATTGGTCAATT 267124 ||||||| ||||| || || Sbjct 727 GTATGACTATTGGACATTT 745 >seq125 Length=3022 Score = 98.7 bits (108), Expect = 3e-15 Identities = 126/171 (74%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 266950 TAAGAACATTACGCCAACCAGTAATCGGCGATAAATTTTCTAGTCGCCACGGACAAAAAG 267009 ||||| || | | |||||| | | || ||||||||| | | | || |||||||| | Sbjct 2658 TAAGATCAACAAGACAACCACAAGTTGGTGATAAATTTGCATCTAGACATGGACAAAAGG 2717 Query 267010 GTACCATTGGTACGATTATT-CCTGAAGAAAATATGCCATTTAATGAAGATGGAATTAGA 267068 | || | |||||||| ||| ||||| ||||||||||| |||| ||| ||| Sbjct 2718 GGGTTGTTTCT-CGATTATTTCCTCAAGAAGATATGCCATTTGCTGAAAGTGGTATTGTT 2776 Query 267069 CCTGATATTATTATTAATCCTCATGCTATTCCTAGTCGTATGACAATTGGT 267119 |||||||||||| | |||||||||| |||||| ||||||||| || ||| Sbjct 2777 CCTGATATTATTTTCAATCCTCATGGTATTCCATCTCGTATGACTATAGGT 2827 >seq6080 Length=793 Score = 95.1 bits (104), Expect = 4e-14 Identities = 97/124 (78%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 250925 ATTTTATCTTTTACTATATGTTTTAATCTCATATAATATGTTGGCCCAATAAATATAT-T 250983 |||||||||| ||| |||||||||||| | ||||||| |||| || |||||||||| | Sbjct 278 ATTTTATCTTGTACCATATGTTTTAATTTTTGATAATATATTGGTCCCATAAATATATAT 219 Query 250984 CATTCTCATTTGTTCACCTGTTTCTCCACTATATAATATTTCATTTGCAGATGAATTAAA 251043 |||| | ||||||||||| |||| |||||||| ||| || ||| ||||||| Sbjct 218 GTTTCTAAAG-GTTCACCTGTTAATCCAGAATATAATAATTCTTTACTAGAACAATTAAA 160 Query 251044 TCCA 251047 |||| Sbjct 159 TCCA 156 Score = 86.0 bits (94), Expect = 2e-11 Identities = 121/168 (72%), Gaps = 4/168 (2%) Strand=Plus/Plus Query 267250 GTAATGAAATATTATATGATGGATTATCTGGTGAACAGATGAGAACAAATGTATTTATCG 267309 |||| ||| |||||||| ||||||| | ||||||| | |||| || ||||||| | Sbjct 173 GTAAAGAATTATTATATTCTGGATTAACAGGTGAACCTTTAGAAACATATATATTTATGG 232 Query 267310 GGCCAGCATTTTATCAAAGATTAAAACATATGGTTAGTGATAAACAACATAGTAGAAGTA 267369 | ||| || |||||||| ||||||||||||||| |||||| ||| |||| || Sbjct 233 GACCAATATATTATCAAAAATTAAAACATATGGTACAAGATAAAATCCATGCTAGAGCTA 292 Query 267370 TTGGTCCTATGGTAAATT--TAACTCGTCAACCAGCGGAAGGTAGATC 267415 || || | | |||| | || | |||||| | ||||||||||| Sbjct 293 GAGGACCAA--GACAATTACTCACAAGACAACCAACTGAAGGTAGATC 338 >seq16374 Length=414 Score = 87.8 bits (96), Expect = 5e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 54752 AAGGAGTTAGCTGATATAAATAGTAATCCACCAACAAATTGTTCAGCTGGAGTAATAGAT 54811 ||||| ||| ||| | |||| |||| || |||||||||||||| || || | | Sbjct 260 AAGGAATTACAAGATTTGAATAAAGATCCCCCTACAAATTGTTCAGCGGGTCCTATTGGT 319 Query 54812 GATGATATTTTTCATTGGCAAGCAACAATTATGGGACCAGAAGATA 54857 |||||| | ||| |||||||||||||||||||||||||| ||||| Sbjct 320 GATGATTTATTTTTTTGGCAAGCAACAATTATGGGACCAGGAGATA 365 >seq5887 Length=807 Score = 86.0 bits (94), Expect = 2e-11 Identities = 128/179 (72%), Gaps = 2/179 (1%) Strand=Plus/Plus Query 390774 ATATGGGATGGAAACGGTTCAAGAGATTTTTTAGATAGTAGAGGCTTAACTAATTTAGAA 390833 |||||||| | || ||| | || || |||||||||| |||| ||| | || |||| Sbjct 615 ATATGGGAAGCTAATGGTACTAGGGAATTTTTAGATAATAGAAAATTATTTCATAGAGAA 674 Query 390834 GAAGATGATTTAGGGCCAGTATATGGACATCAATGGAGACATTTTAATGCACCATATACA 390893 | | |||||||| || | ||||| ||||||||||||||| ||| ||||||| Sbjct 675 GTTAACGATTTAGGACCTATTTATGGTTTTCAATGGAGACATTTCGGTGCTGAATATACA 734 Query 390894 AACTGTGAAACA-GACTATACAGATAAAGGTGTAGATCAATTAGAATATATTATTAATT 390951 || | || | | | ||| | ||||||| || ||||||||| || |||| || |||| Sbjct 735 AA-TATGTATGATAATTATGAAAATAAAGGAGTGGATCAATTAAAAAATATAATAAATT 792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514754367942068