Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F000576715.1_202014-02-03] 25,756 sequences; 16,303,117 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq15732 89.7 1e-12 seq8 86.0 1e-11 >seq15732 Length=427 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/100 (82%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825 |||||| |||||||| |||| ||| ||||| | |||| ||| | || ||| | ||||| Sbjct 425 TGAGAGGATGATCAGTCACACTGGAACTGAGACACGGTCCA-GACTCCTACGGGAGGCAG 367 Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAG 6865 |||||| ||||||| |||||||||||||||| ||||| || Sbjct 366 CAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAG 327 >seq8 Length=4933 Score = 86.0 bits (94), Expect = 1e-11 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727 ||| ||||||||| |||||||| ||||||||||||||||| | || ||||| ||| | Sbjct 3111 ATACTTCAGGATGTCCAAAAAACCAGAATAAATGTTGATATAATATTGGATCTCCTGCAA 3052 Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAAT 370757 || ||| |||||||| ||||||||||| Sbjct 3051 ATGTTGGGTCAAAAAATAAAGTATTAAAAT 3022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192137666194664