Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F001602025.1_202016-04-08] 833 sequences; 20,385,537 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq169 100 2e-16 >seq169 Length=6603 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| || ||||||||||| ||||| || ||||| || || ||||||| ||| | Sbjct 5551 ATGCAAATTTTTGTTAAAACATTAACAGGAAAAACCATTACTCTCGATGTTGAACCATCT 5492 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | || | |||||| | ||||||| | |||||||| | || |||||| Sbjct 5491 GACACCATTGAGAATGTTAAAGCAAAAATTCAAGATAAAGAAGGAATTCCACCTGACCAA 5432 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||| | ||||||| ||| || |||||| | || || | ||| | ||||||| Sbjct 5431 CAAAGATTAATATTTGCCGGAAAACAATTAGAGGACGGAAGAACTCTATCAGATTACAAT 5372 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATT 25049 || || ||||| |||| | || ||||||||| |||| Sbjct 5371 ATTCAAAAAGAATCCACCTTACACTTAGTGTTAAGATT 5334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418299753299360