Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F001602025.1_202016-04-08] 833 sequences; 20,385,537 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq9 102 2e-16 >seq9 Length=776283 Score = 102 bits (112), Expect = 2e-16 Identities = 323/495 (65%), Gaps = 8/495 (2%) Strand=Plus/Plus Query 35234 ACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGTTCATCAGGGGC 35293 ||||| |||||| | |||| |||||| || | |||||| | ||||| || || || Sbjct 511528 ACTACAAAGAAATTATTCTTAAGAGGAATTATTGAAGAATTGCTTTGGTTTATTAGAGGA 511587 Query 35294 AATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACACATCTGGAACGCTAATGGGTCG 35353 | ||| | | || || || ||||| || || ||| | |||||||| | Sbjct 511588 GAAACAAATGGTAATACGCTGTTAAATAAGAATGTAAGGATATGGGAAGCTAATGGTACT 511647 Query 35354 CGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTA 35413 |||||||||| || | |||| |||| |||||| || ||||| ||||| | Sbjct 511648 AGGGAATTTTTAGATAATAGAAAATTATTTCATAGAGAAGTTAACGATTTAGGACCTATT 511707 Query 35414 TACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCCGATTATACT 35473 || || || |||||| | ||||| || ||||||||| | | | | | | ||| || | Sbjct 511708 TATGGTTTTCAATGGAGACATTTCGGAGCTGAATAT-ACAAATATGCAT--GATAATTAT 511764 Query 35474 GGAAAG---GGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAAAATCC-AGA 35529 | ||| ||| |||||||||| |||||| |||| | | | | |||| | | Sbjct 511765 GAAAATAAAGGTGTTGATCAATTAAAAAATATAATAAATTTAATTAAAAATGATCCTACA 511824 Query 35530 TGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCTCTTCC 35589 | |||||| || || || ||||||||| | |||||| ||| ||||| | || Sbjct 511825 AG-TAGAAGAATTCTTTTGTGTGCATGGAATGTAAAAGATCTTGACCAAATGGCATTACC 511883 Query 35590 TCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCAGTTGTA 35649 ||| || || || |||||||||||| ||||| |||| || || |||| Sbjct 511884 TCCTTGTCATATTTTATGTCAATTTTATGTTTTCGATGGAAAATTATCATGTATTATGTA 511943 Query 35650 TCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTCTCTTCT 35709 ||| | | ||| | || | || || || || |||||||| || || ||| || | Sbjct 511944 TCAAAGGTCATGTGATTTAGGACTAGGAGTACCTTTTAATATTGCTTCTTATTCTATTTT 512003 Query 35710 GACTCATCTGATGGC 35724 |||||| |||| || Sbjct 512004 TACTCATATGATTGC 512018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989573438355515