Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F001602025.1_202016-04-08] 833 sequences; 20,385,537 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq169 89.7 5e-13 >seq169 Length=6603 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 131025 CACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTC 131084 |||||| |||| ||| || || |||||||| |||||||| | || | |||||| Sbjct 5342 CACTAAGTGTAAGGTGGATTCTTTTTGAATATTGTAATCTGATAGAGTTCTTCCGTCCTC 5401 Query 131085 TAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGT 131144 || || || || || | ||||| | || ||||| || || ||||||||||| || | Sbjct 5402 TAATTGTTTTCCGGCAAATATTAATCTTTGTTGGTCAGGTGGAATTCCTTCTTTATC-TT 5460 Query 131145 GATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTT 131203 || ||| ||||| | | | ||| | || || | | || | |||| |||| ||||| Sbjct 5461 GAATTTTTGCTTTAACATTCTCAATGGTGTCAGATGGTTCAACATCGAGAGTAATGGTTT 5520 Query 131204 TACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 | || |||| ||||| || ||||| ||||| Sbjct 5521 TTCCTGTTAATGTTTTAACAAAAATTTGCAT 5551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472007885166720