Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F001602025.1_202016-04-08] 833 sequences; 20,385,537 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq9 98.7 2e-15 >seq9 Length=776283 Score = 98.7 bits (108), Expect = 2e-15 Identities = 132/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 133942 TGCATGGAATGTTGGTGAACTAGATAAAATGACTTTGCCACCATGTCATTGCTTTAGTCA 134001 |||||||||||| || || || ||||| | || || || |||||| || |||| Sbjct 511845 TGCATGGAATGTAAAAGATCTTGACCAAATGGCATTACCTCCTTGTCATATTTTATGTCA 511904 Query 134002 ATTCTTCGTAAATGACGGTAAGTTATCATGTATTCTATATCAACGTAGCTGTGATCTATT 134061 ||| | || || || || |||||||||||| | |||||| | |||||| || Sbjct 511905 ATTTTATGTTTTCGATGGAAAATTATCATGTATTATGTATCAAAGGTCATGTGATTTAGG 511964 Query 134062 CTTAGGAGTACCATTCAACATTGCTTCATATTCATTACTAACTCATATGTTAGCACAAGT 134121 |||||||||| || || |||||||| ||||| | | ||||||||| | |||||||| Sbjct 511965 ACTAGGAGTACCTTTTAATATTGCTTCTTATTCTATTTTTACTCATATGATTGCACAAGT 512024 Query 134122 TTGT 134125 ||| Sbjct 512025 CTGT 512028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147578151982834