Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F001602025.1_202016-04-08] 833 sequences; 20,385,537 total letters Query= NC_026242.1 Length=145704 Score E Sequences producing significant alignments: (Bits) Value seq12 91.5 1e-13 seq186 84.2 2e-11 >seq12 Length=1108057 Score = 91.5 bits (100), Expect = 1e-13 Identities = 81/99 (82%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 39772 TATCAGGCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGT 39831 ||| | ||||| |||||||||||| |||| || ||| |||||||||| || ||||| || Sbjct 1057506 TATTAAGCGGGCATGGTCTAGTGGCTATGACGCCTGCCTTACACGCAGGAGATCCCGAGT 1057565 Query 39832 TCAATCCCCGGTGCCCGTATTTCTGATAACTTTTCTTTT 39870 || |||| |||||||||||||| | || ||||| |||| Sbjct 1057566 TCGATCCTCGGTGCCCGTATTT-TTAT-ACTTTATTTTT 1057602 >seq186 Length=1641 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||||||||||| |||| || ||| | |||||||| || ||||| |||| ||| Sbjct 1515 GCGGGCATGGTCTAGTGGCTATGACGCCTGCCTAACACGCAGGAGATCCCGAGTTCGATC 1574 Query 39838 CCCGGTGCCCGTATTT 39853 | |||||||||||||| Sbjct 1575 CTCGGTGCCCGTATTT 1590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466119946475520