Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F001602025.1_202016-04-08] 833 sequences; 20,385,537 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq169 116 9e-21 >seq169 Length=6603 Score = 116 bits (128), Expect = 9e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 |||||||||||||| | ||||||||| | | |||||| || || |||| || || || Sbjct 5355 GTGGATTCTTTTTGAATATTGTAATCTGATAGAGTTCTTCCGTCCTCTAATTGTTTTCCG 5414 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC-TT 225635 || || || | || ||||||||| || ||||| ||||| || ||||| || |||||| || Sbjct 5415 GCAAATATTAATCTTTGTTGGTCAGGTGGAATTCCTTCTTTATCTTGAAT-TTTTGCTTT 5473 Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695 ||| || |||||||| || | ||| || || | || || || || || || || || Sbjct 5474 AACATTCTCAATGGTGTCAGATGGTTCAACATCGAGAGTAATGGTTTTTCCTGTTAATGT 5533 Query 225696 TTTTATGAACACTTGCAT 225713 ||| | || | |||||| Sbjct 5534 TTTAACAAAAATTTGCAT 5551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192518472338102