Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F001602025.1_202016-04-08] 833 sequences; 20,385,537 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq169 105 1e-17 >seq169 Length=6603 Score = 105 bits (116), Expect = 1e-17 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGT 282956 ||||| || ||| ||||| ||||||||||| | | || | ||||| |||| |||| Sbjct 5577 TGTAATGTAGATTCCTTTTGAATGTTGTAGTCTGATAATGTTCTTCCATCTTCTAATTGT 5636 Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || || ||||| || || | |||||||||| ||||| || || || ||||| || ||| Sbjct 5637 TTTCCAGCAAATATTAATCTTTGTTGGTCAGGTGGAATTCCTTCTTTATCTTGAATTTTT 5696 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACC 283072 || ||||| | || |||||||| || | ||||| || || || || || || || Sbjct 5697 GCCTTTACATTCTCAATAGTGTCAGATGGCTCGACGTCAAGGGTTATAGTTTTTCC 5752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046728028348782