Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq13 96.9 4e-15 >seq13 Length=2538962 Score = 96.9 bits (106), Expect = 4e-15 Identities = 243/364 (67%), Gaps = 4/364 (1%) Strand=Plus/Minus Query 16382 ATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTA 16441 |||||||| | ||||| ||||| | ||||| | || ||||||| || | | Sbjct 2310101 ATCCATTTGGCTGCCCATAATGCTTTATTTTTTACAGCTGGTATATTTTCTATAGCATGA 2310042 Query 16442 AACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATT 16501 || || ||| | |||| | ||| |||| || ||||||| | ||||||||| || Sbjct 2310041 AATAAATTCAATCTTTCTTTTTCATCCTTTATGTAATTATCAATTAATAAACTGTATGTT 2309982 Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561 || || ||||| || || | ||||| ||||| ||| || | ||||| | ||| Sbjct 2309981 TCGGAATGTATATTTTCAACAGCTATTTGAAAAGAATAAAATTTTTTTGCCTCTGTAATT 2309922 Query 16562 TGTACTTCCACGTAAAATCGTTCC-GCCAGGTTCTCATTCACGATACCGTCACTTGCAGC 16620 || |||| ||||||| | | | || | || || || || || |||||||| || Sbjct 2309921 TGAACTTGT-CGTAAAAACTTACTAGCTAAATTTTCCAAAACAATTCCATCACTTGCTGC 2309863 Query 16621 AAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAG-ATGTAAGAATATGCCAAT 16679 |||||| || || | || || || |||| ||||| | | || ||| | | ||| Sbjct 2309862 AAAAAATGCTAAAACATGTTTTATAAAATGCTTTTCATTATCATTTAATTTTTCGA-AAT 2309804 Query 16680 CTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTT 16739 |||||||||| | |||| ||| | ||| || | |||||||| || |||| |||| Sbjct 2309803 CTTTTAAATCACTCGATAAATCTATTTCCTCCGCTGTCCAAAATGATGCTTCTGCTTTTT 2309744 Query 16740 TATA 16743 |||| Sbjct 2309743 TATA 2309740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511409650238760