Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq5 156 3e-33 >seq5 Length=1204002 Score = 156 bits (172), Expect = 3e-33 Identities = 302/446 (68%), Gaps = 0/446 (0%) Strand=Plus/Minus Query 97072 TGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATC 97131 ||||||| ||| ||| |||| || || | | |||| |||| | || || || ||| Sbjct 866329 TGAGCATTTCCCAAAATGTGTATGAACTGTGCAGGTTGCAAATTACATACCTGTGCAATC 866270 Query 97132 ATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCT 97191 ||| || || | ||||| ||||||||||| || || |||| |||| |||| Sbjct 866269 ATATGTGTGAAAATGGAATAAGAGGCAATGTTAAAGGGAACTCCTAAACCCAAATCACAG 866210 Query 97192 GATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGACTCAATACA 97251 ||||||||||| | ||| || | || |||||| | |||||||| || | || | | Sbjct 866209 GATCTTTGATACATAATACATGATAATTTACCATCAAAAACATAAAATTGGCATAAAATA 866150 Query 97252 TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATT 97311 ||||| || || || |||||||| | |||| |||||||| ||||||| | ||| Sbjct 866149 TGACAAGGTGGTAATGCCATTTTATCTAAATCTTTTACATTCCATGCACACAAAATAATT 866090 Query 97312 CTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCT 97371 || ||| ||||| | | | ||| || ||| | | |||||||||||||| ||| Sbjct 866089 CTCCTACTAGTTGGTTCATTCTTTATTAAATCAATCACATTTTTTAATTGATCAACTCCT 866030 Query 97372 TCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAAT 97431 | | |||||| | | | | | |||||| || ||||| || ||||| || || Sbjct 866029 TTGTCTTTATAATTATCATGCATATTTGTATATTCAGCACCAAAGTGTCTCCACTGAAAA 865970 Query 97432 CCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAG 97491 ||||||| ||| || | || | ||||||||||| | || ||||| ||| | Sbjct 865969 CCATAAATAGGCCCTAAATCATTTACTTCTCTATCAAATAATTTTCTATTATCCAAAAAT 865910 Query 97492 GACCTAGATCCATTTGCATCCCAAAT 97517 ||| | ||||||||| ||||| || Sbjct 865909 TCCCTCGTTCCATTTGCTTCCCATAT 865884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346780859762510