Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq9 102 1e-17 >seq9 Length=2239043 Score = 102 bits (112), Expect = 1e-17 Identities = 170/243 (70%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||||||||| ||||| ||||| || ||||| ||| | ||| |||| | | || || | Sbjct 170401 GAGATAACATTCAAGGTATCACAAAACCAGCCATCAGACGTTTGGCAAGAAGAGGAGGTG 170342 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | |||||| | ||||| || | || ||||| ||| | | || || || | ||| | Sbjct 170341 TTAAGCGTATTTCTGGTTTAATATACGAAGAAATTAGAGGAGTATTAAAAGTTTTCTTAG 170282 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 | | || || | ||| | || ||||| || || || || | |||||||| || Sbjct 170281 AAAATGTAATTAAAGATTCCATCATGTATACTGAACATGCAAAGAGAAAGACTGTTACTG 170222 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATT-TATGGTTTTGGAAGT 16696 | |||||||| || || |||||||| | ||||| | || ||| ||||||||||| || Sbjct 170221 CTATGGATATTGTATACTCATTGAAAAGACAAGGAAG-AACATTATATGGTTTTGGTGGT 170163 Query 16697 TAA 16699 ||| Sbjct 170162 TAA 170160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074520669899