Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq11 122 7e-23 seq13 87.8 2e-12 >seq11 Length=2227116 Score = 122 bits (134), Expect = 7e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 |||||||||| | || |||||||||||||| |||||| | || ||| | || |||||| | Sbjct 206461 CAAAATGCAAATATTCGTAAAAACATTAACCGGAAAAACCATCACCCTTGATGTCGAGTC 206520 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 || || || ||| | || || ||| ||| || || ||||| || || ||||| Sbjct 206521 ATCTGATACGATTGAGAATGTTAAGGCAAAAATTCAAGATAAGGAAGGAATTCCACCCGA 206580 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATT 24165 |||||||||| | || | | || || ||||| ||||||| ||| ||| | ||| || | Sbjct 206581 TCAACAGAGATTAATATTTGCAGGAAAACAACTAGAAGATGGCAG-AACATTAGCTGACT 206639 Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||||| || || || || | ||||| || Sbjct 206640 ATAACATTCAGAAGGAGTCCACTTTACATTTGGT 206673 >seq13 Length=2538962 Score = 87.8 bits (96), Expect = 2e-12 Identities = 175/256 (68%), Gaps = 5/256 (2%) Strand=Plus/Minus Query 133022 TCAAATTCTTCGCCATAGCAGTCGTTCAAACCGGGACACTCGTCAGGACACATCAATGAC 133081 ||||||||||| || | ||| | || || |||||||| | |||||||| || | | Sbjct 814848 TCAAATTCTTCACCCCATGTTTCGCTTAACCCTGGACACTCATTTGGACACATTAAAGTC 814789 Query 133082 CATTTTTCTCCTGCGCTCACCCTTTTCATGAACAACGAAGGTGTCCACATGGCAAAAAAT 133141 || |||| | | | || |||||||| || | || ||||| ||| | || Sbjct 814788 CAATTTTTATTTTCTTTAACTCTTTTCATAAAAAGATCTGGAACCCACACAGCATAGAAA 814729 Query 133142 AAATCGCGAGC-CTTCATATCTTCCGCGCCCATATTTCGTTTCAAGTCCaaaaaagtaaa 133200 | ||| ||||| ||| || ||||| || |||| | | || || ||||| ||| Sbjct 814728 AGATCTCGAGCTCTTAAT-TCTTCTTTTCCATGATTTTTTCTTAAATCTAAAAATTCAAA 814670 Query 133201 aaTGTCTGCATGCCAAGGCTCGATATATACGGCCAAAGCGCCTTTCCTTTT---ACCTCC 133257 |||||| | |||||| || || || ||||| || |||| ||||| ||||| ||||| Sbjct 814669 AATGTCAGAATGCCATGGTTCAATGTATACAGCAAAAGATCCTTTTCTTTTCCCTCCTCC 814610 Query 133258 CTGATCCACATGTCTA 133273 ||||| |||| |||| Sbjct 814609 TTGATCTACATATCTA 814594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429932106795165