Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq13 107 2e-18 seq11 107 2e-18 >seq13 Length=2538962 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| || || | || ||||||||||| || | || ||||| Sbjct 758952 ATGCAAATTTTTGTAAAGACTTTAACAGGAAAAACCATCACACTAGACGTTGAGTCATCA 759011 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | || || ||||| ||||||||||| | || ||| ||| Sbjct 759012 GACACAATTGAAAACGTCAAGGCTAAAATACAAGATAAAGAAGGAATTCCACCTGACCAG 759071 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 |||||| | || | ||| || |||||||||||||||| | ||| | | |||||||| Sbjct 759072 CAAAGATTAATATTTGCAGGAAAACAATTAGAAGATGGAAGAACATTATCAGATTATAAT 759131 Query 115466 ATTCAAAAAGAGTCTACTATACAT 115489 || ||||| || |||||| ||||| Sbjct 759132 ATCCAAAAGGAATCTACTTTACAT 759155 >seq11 Length=2227116 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 ||||||||||| || || ||||| | || ||||||||||| ||| | || ||||| Sbjct 206462 AAAATGCAAATATTCGTAAAAACATTAACCGGAAAAACCATCACCCTTGATGTCGAGTCA 206521 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 || || ||| | || || ||||||| ||||| ||||| | || ||| Sbjct 206522 TCTGATACGATTGAGAATGTTAAGGCAAAAATTCAAGATAAGGAAGGAATTCCACCCGAT 206581 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 || || ||| | || | ||| || |||||| ||||||||| || ||| | || || ||| Sbjct 206582 CAACAGAGATTAATATTTGCAGGAAAACAACTAGAAGATGGCAGAACATTAGCTGACTAT 206641 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGT 115494 |||||||| || ||||| ||| ||||| |||| Sbjct 206642 AACATTCAGAAGGAGTCCACTTTACATTTGGT 206673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425340148377160